These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

806 related articles for article (PubMed ID: 20130030)

  • 21. An Agile Functional Analysis of Metagenomic Data Using SUPER-FOCUS.
    Silva GGZ; Lopes FAC; Edwards RA
    Methods Mol Biol; 2017; 1611():35-44. PubMed ID: 28451970
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Comparison of multiple metagenomes using phylogenetic networks based on ecological indices.
    Mitra S; Gilbert JA; Field D; Huson DH
    ISME J; 2010 Oct; 4(10):1236-42. PubMed ID: 20428222
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Omega: an overlap-graph de novo assembler for metagenomics.
    Haider B; Ahn TH; Bushnell B; Chai J; Copeland A; Pan C
    Bioinformatics; 2014 Oct; 30(19):2717-22. PubMed ID: 24947750
    [TBL] [Abstract][Full Text] [Related]  

  • 24. sORF finder: a program package to identify small open reading frames with high coding potential.
    Hanada K; Akiyama K; Sakurai T; Toyoda T; Shinozaki K; Shiu SH
    Bioinformatics; 2010 Feb; 26(3):399-400. PubMed ID: 20008477
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Sigma: strain-level inference of genomes from metagenomic analysis for biosurveillance.
    Ahn TH; Chai J; Pan C
    Bioinformatics; 2015 Jan; 31(2):170-7. PubMed ID: 25266224
    [TBL] [Abstract][Full Text] [Related]  

  • 26. A fast and flexible approach to oligonucleotide probe design for genomes and gene families.
    Feng S; Tillier ER
    Bioinformatics; 2007 May; 23(10):1195-202. PubMed ID: 17392329
    [TBL] [Abstract][Full Text] [Related]  

  • 27. A user's guide to quantitative and comparative analysis of metagenomic datasets.
    Luo C; Rodriguez-R LM; Konstantinidis KT
    Methods Enzymol; 2013; 531():525-47. PubMed ID: 24060135
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Isolation independent methods of characterizing phage communities 2: characterizing a metagenome.
    Wommack KE; Bench SR; Bhavsar J; Mead D; Hanson T
    Methods Mol Biol; 2009; 502():279-89. PubMed ID: 19082562
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Suppressive subtractive hybridization as a tool for identifying genetic diversity in an environmental metagenome: the rumen as a model.
    Galbraith EA; Antonopoulos DA; White BA
    Environ Microbiol; 2004 Sep; 6(9):928-37. PubMed ID: 15305918
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Exploration of community traits as ecological markers in microbial metagenomes.
    Barberán A; Fernández-Guerra A; Bohannan BJ; Casamayor EO
    Mol Ecol; 2012 Apr; 21(8):1909-17. PubMed ID: 22121910
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Elviz - exploration of metagenome assemblies with an interactive visualization tool.
    Cantor M; Nordberg H; Smirnova T; Hess M; Tringe S; Dubchak I
    BMC Bioinformatics; 2015 Apr; 16(1):130. PubMed ID: 25928663
    [TBL] [Abstract][Full Text] [Related]  

  • 32. COGNIZER: A Framework for Functional Annotation of Metagenomic Datasets.
    Bose T; Haque MM; Reddy C; Mande SS
    PLoS One; 2015; 10(11):e0142102. PubMed ID: 26561344
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Classification of metagenomic sequences: methods and challenges.
    Mande SS; Mohammed MH; Ghosh TS
    Brief Bioinform; 2012 Nov; 13(6):669-81. PubMed ID: 22962338
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Metagenomics: read length matters.
    Wommack KE; Bhavsar J; Ravel J
    Appl Environ Microbiol; 2008 Mar; 74(5):1453-63. PubMed ID: 18192407
    [TBL] [Abstract][Full Text] [Related]  

  • 35. An experimental metagenome data management and analysis system.
    Markowitz VM; Ivanova N; Palaniappan K; Szeto E; Korzeniewski F; Lykidis A; Anderson I; Mavromatis K; Kunin V; Garcia Martin H; Dubchak I; Hugenholtz P; Kyrpides NC
    Bioinformatics; 2006 Jul; 22(14):e359-67. PubMed ID: 16873494
    [TBL] [Abstract][Full Text] [Related]  

  • 36. SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data.
    Silva GG; Green KT; Dutilh BE; Edwards RA
    Bioinformatics; 2016 Feb; 32(3):354-61. PubMed ID: 26454280
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Bambus 2: scaffolding metagenomes.
    Koren S; Treangen TJ; Pop M
    Bioinformatics; 2011 Nov; 27(21):2964-71. PubMed ID: 21926123
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data.
    Su X; Xu J; Ning K
    Bioinformatics; 2012 Oct; 28(19):2493-501. PubMed ID: 22843983
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Metagenomic era for biocatalyst identification.
    Fernández-Arrojo L; Guazzaroni ME; López-Cortés N; Beloqui A; Ferrer M
    Curr Opin Biotechnol; 2010 Dec; 21(6):725-33. PubMed ID: 20934867
    [TBL] [Abstract][Full Text] [Related]  

  • 40. A simulation test bed for hypotheses of genome evolution.
    Beiko RG; Charlebois RL
    Bioinformatics; 2007 Apr; 23(7):825-31. PubMed ID: 17267425
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 41.