These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
179 related articles for article (PubMed ID: 20174456)
21. An Implementation of the Smooth Particle Mesh Ewald Method on GPU Hardware. Harvey MJ; De Fabritiis G J Chem Theory Comput; 2009 Sep; 5(9):2371-7. PubMed ID: 26616618 [TBL] [Abstract][Full Text] [Related]
22. Optimization of parameters for molecular dynamics simulation using smooth particle-mesh Ewald in GROMACS 4.5. Abraham MJ; Gready JE J Comput Chem; 2011 Jul; 32(9):2031-40. PubMed ID: 21469158 [TBL] [Abstract][Full Text] [Related]
26. A fast and accurate computational method for the linear-combination-based isotropic periodic sum. Takahashi KZ; Nozawa T; Yasuoka K Sci Rep; 2018 Aug; 8(1):11880. PubMed ID: 30089878 [TBL] [Abstract][Full Text] [Related]
27. An Exact Ewald Summation Method in Theory and Practice. Stenberg S; Stenqvist B J Phys Chem A; 2020 May; 124(19):3943-3946. PubMed ID: 32285671 [TBL] [Abstract][Full Text] [Related]
30. Rapid QM/MM approach for biomolecular systems under periodic boundary conditions: Combination of the density-functional tight-binding theory and particle mesh Ewald method. Nishizawa H; Okumura H J Comput Chem; 2016 Dec; 37(31):2701-2711. PubMed ID: 27718264 [TBL] [Abstract][Full Text] [Related]
32. Acceleration of Ab Initio QM/MM Calculations under Periodic Boundary Conditions by Multiscale and Multiple Time Step Approaches. Nam K J Chem Theory Comput; 2014 Oct; 10(10):4175-83. PubMed ID: 26588116 [TBL] [Abstract][Full Text] [Related]
33. Reconsidering Dispersion Potentials: Reduced Cutoffs in Mesh-Based Ewald Solvers Can Be Faster Than Truncation. Isele-Holder RE; Mitchell W; Hammond JR; Kohlmeyer A; Ismail AE J Chem Theory Comput; 2013 Dec; 9(12):5412-20. PubMed ID: 26592279 [TBL] [Abstract][Full Text] [Related]
35. Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method. Konerding DE; Cheatham TE; Kollman PA; James TL J Biomol NMR; 1999 Feb; 13(2):119-31. PubMed ID: 10070753 [TBL] [Abstract][Full Text] [Related]
36. GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. Hess B; Kutzner C; van der Spoel D; Lindahl E J Chem Theory Comput; 2008 Mar; 4(3):435-47. PubMed ID: 26620784 [TBL] [Abstract][Full Text] [Related]
37. A GPU-Accelerated Fast Multipole Method for GROMACS: Performance and Accuracy. Kohnke B; Kutzner C; Grubmüller H J Chem Theory Comput; 2020 Nov; 16(11):6938-6949. PubMed ID: 33084336 [TBL] [Abstract][Full Text] [Related]
38. Periodic Coulomb Tree Method: An Alternative to Parallel Particle Mesh Ewald. Boateng HA J Chem Theory Comput; 2020 Jan; 16(1):7-17. PubMed ID: 31747267 [TBL] [Abstract][Full Text] [Related]
39. Ambient-Potential Composite Ewald Method for ab Initio Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulation. Giese TJ; York DM J Chem Theory Comput; 2016 Jun; 12(6):2611-32. PubMed ID: 27171914 [TBL] [Abstract][Full Text] [Related]
40. Extension and evaluation of the multilevel summation method for fast long-range electrostatics calculations. Moore SG; Crozier PS J Chem Phys; 2014 Jun; 140(23):234112. PubMed ID: 24952528 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]