BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

126 related articles for article (PubMed ID: 20217571)

  • 1. Determination of alternate splicing events using the Affymetrix Exon 1.0 ST arrays.
    Subbaram S; Kuentzel M; Frank D; Dipersio CM; Chittur SV
    Methods Mol Biol; 2010; 632():63-72. PubMed ID: 20217571
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis.
    Whistler T; Chiang CF; Lonergan W; Hollier M; Unger ER
    BMC Genomics; 2010 Sep; 11():496. PubMed ID: 20840771
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh; Coulombe-Huntington J; Majewski J
    BMC Genomics; 2009 Nov; 10():519. PubMed ID: 19909511
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing.
    Castle J; Garrett-Engele P; Armour CD; Duenwald SJ; Loerch PM; Meyer MR; Schadt EE; Stoughton R; Parrish ML; Shoemaker DD; Johnson JM
    Genome Biol; 2003; 4(10):R66. PubMed ID: 14519201
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A; Benovoy D; Kwan T; Gaffney DJ; Jensen RV; Majewski J
    BMC Genomics; 2008 Nov; 9():529. PubMed ID: 18990248
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
    Yoshida R; Numata K; Imoto S; Nagasaki M; Doi A; Ueno K; Miyano S
    Genome Inform; 2006; 17(1):88-99. PubMed ID: 17503359
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.
    Raghavachari N; Barb J; Yang Y; Liu P; Woodhouse K; Levy D; O'Donnell CJ; Munson PJ; Kato GJ
    BMC Med Genomics; 2012 Jun; 5():28. PubMed ID: 22747986
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W; Khalid N; Hallahan AR; Olson JM; Zhao LP
    Theor Biol Med Model; 2006 Apr; 3():19. PubMed ID: 16603076
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Exon-based clustering of murine breast tumor transcriptomes reveals alternative exons whose expression is associated with metastasis.
    Dutertre M; Lacroix-Triki M; Driouch K; de la Grange P; Gratadou L; Beck S; Millevoi S; Tazi J; Lidereau R; Vagner S; Auboeuf D
    Cancer Res; 2010 Feb; 70(3):896-905. PubMed ID: 20103641
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Gene Array Analyzer: alternative usage of gene arrays to study alternative splicing events.
    Gellert P; Teranishi M; Jenniches K; De Gaspari P; John D; Kreymborg Kg; Braun T; Uchida S
    Nucleic Acids Res; 2012 Mar; 40(6):2414-25. PubMed ID: 22123740
    [TBL] [Abstract][Full Text] [Related]  

  • 11. RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays.
    Seok J; Xu W; Davis RW; Xiao W
    Sci Rep; 2015 Jul; 5():11917. PubMed ID: 26145443
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Determination of Alternate Splicing Events Using Transcriptome Arrays.
    DeVaux RS; Kuentzel M; Herschkowitz J; Chittur SV
    Methods Mol Biol; 2017; 1507():245-259. PubMed ID: 27832545
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.
    Kechris K; Yang YH; Yeh RF
    BMC Genomics; 2008 Nov; 9():551. PubMed ID: 19021909
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Towards a therapeutic inhibition of dystrophin exon 23 splicing in mdx mouse muscle induced by antisense oligoribonucleotides (splicomers): target sequence optimisation using oligonucleotide arrays.
    Graham IR; Hill VJ; Manoharan M; Inamati GB; Dickson G
    J Gene Med; 2004 Oct; 6(10):1149-58. PubMed ID: 15386737
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A cross-platform comparison of genome-wide expression changes of laser microdissected lung tissue of C-Raf transgenic mice using 3'IVT and exon array.
    Londhe KB; Borlak J
    PLoS One; 2012; 7(7):e40778. PubMed ID: 22815814
    [TBL] [Abstract][Full Text] [Related]  

  • 16. easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.
    Chang TY; Li YY; Jen CH; Yang TP; Lin CH; Hsu MT; Wang HW
    BMC Bioinformatics; 2008 Oct; 9():432. PubMed ID: 18851762
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Exon-level transcriptome profiling in murine breast cancer reveals splicing changes specific to tumors with different metastatic abilities.
    Bemmo A; Dias C; Rose AA; Russo C; Siegel P; Majewski J
    PLoS One; 2010 Aug; 5(8):e11981. PubMed ID: 20700505
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Profiling alternative splicing on fiber-optic arrays.
    Yeakley JM; Fan JB; Doucet D; Luo L; Wickham E; Ye Z; Chee MS; Fu XD
    Nat Biotechnol; 2002 Apr; 20(4):353-8. PubMed ID: 11923840
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Discovery of tissue-specific exons using comprehensive human exon microarrays.
    Clark TA; Schweitzer AC; Chen TX; Staples MK; Lu G; Wang H; Williams A; Blume JE
    Genome Biol; 2007; 8(4):R64. PubMed ID: 17456239
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
    Gardina PJ; Clark TA; Shimada B; Staples MK; Yang Q; Veitch J; Schweitzer A; Awad T; Sugnet C; Dee S; Davies C; Williams A; Turpaz Y
    BMC Genomics; 2006 Dec; 7():325. PubMed ID: 17192196
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.