BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

91 related articles for article (PubMed ID: 20228445)

  • 21. Structure and dynamics of phospholamban in solution and in membrane bilayer: computer simulations.
    Houndonougbo Y; Kuczera K; Jas GS
    Biochemistry; 2005 Feb; 44(6):1780-92. PubMed ID: 15697203
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Position of helical kinks in membrane protein crystal structures and the accuracy of computational prediction.
    Hall SE; Roberts K; Vaidehi N
    J Mol Graph Model; 2009; 27(8):944-50. PubMed ID: 19285892
    [TBL] [Abstract][Full Text] [Related]  

  • 23. The composition rather than position of polar residues (QxxS) drives aspartate receptor transmembrane domain dimerization in vivo.
    Sal-Man N; Gerber D; Shai Y
    Biochemistry; 2004 Mar; 43(8):2309-13. PubMed ID: 14979727
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Prediction, refinement, and persistency of transmembrane helix dimers in lipid bilayers using implicit and explicit solvent/lipid representations: microsecond molecular dynamics simulations of ErbB1/B2 and EphA1.
    Zhang L; Sodt AJ; Venable RM; Pastor RW; Buck M
    Proteins; 2013 Mar; 81(3):365-76. PubMed ID: 23042146
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations.
    Petrache HI; Grossfield A; MacKenzie KR; Engelman DM; Woolf TB
    J Mol Biol; 2000 Sep; 302(3):727-46. PubMed ID: 10986130
    [TBL] [Abstract][Full Text] [Related]  

  • 26. The trigger sequence in the GCN4 leucine zipper: alpha-helical propensity and multistate dynamics of folding and dimerization.
    Chapagain PP; Liu Y; Gerstman BS
    J Chem Phys; 2008 Nov; 129(17):175103. PubMed ID: 19045375
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Assembly of transmembrane helices of simple polytopic membrane proteins from sequence conservation patterns.
    Park Y; Helms V
    Proteins; 2006 Sep; 64(4):895-905. PubMed ID: 16807902
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Understanding the folding and stability of a zinc finger-based full sequence design protein with replica exchange molecular dynamics simulations.
    Li W; Zhang J; Wang W
    Proteins; 2007 May; 67(2):338-49. PubMed ID: 17285627
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Systematic molecular dynamics searching in a lipid bilayer: application to the glycophorin A and oncogenic ErbB-2 transmembrane domains.
    Beevers AJ; Kukol A
    J Mol Graph Model; 2006 Oct; 25(2):226-33. PubMed ID: 16434222
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins.
    Adamian L; Liang J
    J Mol Biol; 2001 Aug; 311(4):891-907. PubMed ID: 11518538
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A refined model of the thyrotropin-releasing hormone (TRH) receptor binding pocket. Novel mixed mode Monte Carlo/stochastic dynamics simulations of the complex between TRH and TRH receptor.
    Laakkonen LJ; Guarnieri F; Perlman JH; Gershengorn MC; Osman R
    Biochemistry; 1996 Jun; 35(24):7651-63. PubMed ID: 8672466
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Dimerization of the EphA1 receptor tyrosine kinase transmembrane domain: Insights into the mechanism of receptor activation.
    Chavent M; Chetwynd AP; Stansfeld PJ; Sansom MS
    Biochemistry; 2014 Oct; 53(42):6641-52. PubMed ID: 25286141
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Hetero-assembly between all-L- and all-D-amino acid transmembrane domains: forces involved and implication for inactivation of membrane proteins.
    Sal-Man N; Gerber D; Shai Y
    J Mol Biol; 2004 Nov; 344(3):855-64. PubMed ID: 15533450
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Crystal structure of the DNA-binding domain of BldD, a central regulator of aerial mycelium formation in Streptomyces coelicolor A3(2).
    Kim IK; Lee CJ; Kim MK; Kim JM; Kim JH; Yim HS; Cha SS; Kang SO
    Mol Microbiol; 2006 Jun; 60(5):1179-93. PubMed ID: 16689794
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Genetic selection for and molecular dynamic modeling of a protein transmembrane domain multimerization motif from a random Escherichia coli genomic library.
    Leeds JA; Boyd D; Huber DR; Sonoda GK; Luu HT; Engelman DM; Beckwith J
    J Mol Biol; 2001 Oct; 313(1):181-95. PubMed ID: 11601855
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Sampling efficiency in explicit and implicit membrane environments studied by peptide folding simulations.
    Ulmschneider JP; Ulmschneider MB
    Proteins; 2009 May; 75(3):586-97. PubMed ID: 19003985
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A database method for automated map interpretation in protein crystallography.
    Diller DJ; Redinbo MR; Pohl E; Hol WG
    Proteins; 1999 Sep; 36(4):526-41. PubMed ID: 10450094
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Genetic systems for monitoring interactions of transmembrane domains in bacterial membranes.
    Tome L; Steindorf D; Schneider D
    Methods Mol Biol; 2013; 1063():57-91. PubMed ID: 23975772
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Role of dimerization efficiency of transmembrane domains in activation of fibroblast growth factor receptor 3.
    Volynsky PE; Polyansky AA; Fakhrutdinova GN; Bocharov EV; Efremov RG
    J Am Chem Soc; 2013 Jun; 135(22):8105-8. PubMed ID: 23679838
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Spatial structure and pH-dependent conformational diversity of dimeric transmembrane domain of the receptor tyrosine kinase EphA1.
    Bocharov EV; Mayzel ML; Volynsky PE; Goncharuk MV; Ermolyuk YS; Schulga AA; Artemenko EO; Efremov RG; Arseniev AS
    J Biol Chem; 2008 Oct; 283(43):29385-95. PubMed ID: 18728013
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 5.