305 related articles for article (PubMed ID: 20231333)
21. Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution.
Yang Z
Mol Biol Evol; 1998 May; 15(5):568-73. PubMed ID: 9580986
[TBL] [Abstract][Full Text] [Related]
22. Crossing fitness valleys via double substitutions within codons.
Belinky F; Sela I; Rogozin IB; Koonin EV
BMC Biol; 2019 Dec; 17(1):105. PubMed ID: 31842858
[TBL] [Abstract][Full Text] [Related]
23. Large-scale analyses of synonymous substitution rates can be sensitive to assumptions about the process of mutation.
Aris-Brosou S; Bielawski JP
Gene; 2006 Aug; 378():58-64. PubMed ID: 16797879
[TBL] [Abstract][Full Text] [Related]
24. Positive selection for unpreferred codon usage in eukaryotic genomes.
Neafsey DE; Galagan JE
BMC Evol Biol; 2007 Jul; 7():119. PubMed ID: 17640368
[TBL] [Abstract][Full Text] [Related]
25. Selection on codon bias.
Hershberg R; Petrov DA
Annu Rev Genet; 2008; 42():287-99. PubMed ID: 18983258
[TBL] [Abstract][Full Text] [Related]
26. A dissection of volatility in yeast.
Stoletzki N; Welch J; Hermisson J; Eyre-Walker A
Mol Biol Evol; 2005 Oct; 22(10):2022-6. PubMed ID: 15958784
[TBL] [Abstract][Full Text] [Related]
27. Molecular evolution of the Bovini tribe (Bovidae, Bovinae): is there evidence of rapid evolution or reduced selective constraint in Domestic cattle?
MacEachern S; McEwan J; McCulloch A; Mather A; Savin K; Goddard M
BMC Genomics; 2009 Apr; 10():179. PubMed ID: 19393048
[TBL] [Abstract][Full Text] [Related]
28. Evidence for positive selection in the extracellular domain of human cytomegalovirus encoded G protein-coupled receptor US28.
Gong X; Padhi A
J Med Virol; 2011 Jul; 83(7):1255-61. PubMed ID: 21520142
[TBL] [Abstract][Full Text] [Related]
29. Determinants of synonymous and nonsynonymous variability in three species of Drosophila.
Haddrill PR; Zeng K; Charlesworth B
Mol Biol Evol; 2011 May; 28(5):1731-43. PubMed ID: 21191087
[TBL] [Abstract][Full Text] [Related]
30. The molecular clock revisited: the rate of synonymous vs. replacement change in Drosophila.
Zeng LW; Comeron JM; Chen B; Kreitman M
Genetica; 1998; 102-103(1-6):369-82. PubMed ID: 9720289
[TBL] [Abstract][Full Text] [Related]
31. The population genetics of dN/dS.
Kryazhimskiy S; Plotkin JB
PLoS Genet; 2008 Dec; 4(12):e1000304. PubMed ID: 19081788
[TBL] [Abstract][Full Text] [Related]
32. Strong purifying selection at synonymous sites in D. melanogaster.
Lawrie DS; Messer PW; Hershberg R; Petrov DA
PLoS Genet; 2013 May; 9(5):e1003527. PubMed ID: 23737754
[TBL] [Abstract][Full Text] [Related]
33. The rapid evolution of signal peptides is mainly caused by relaxed selection on non-synonymous and synonymous sites.
Li YD; Xie ZY; Du YL; Zhou Z; Mao XM; Lv LX; Li YQ
Gene; 2009 May; 436(1-2):8-11. PubMed ID: 19393172
[TBL] [Abstract][Full Text] [Related]
34. Detecting molecular adaptation at individual codons in the glycoprotein gene of the geographically diversified infectious hematopoietic necrosis virus, a fish rhabdovirus.
Padhi A; Verghese B
Virus Res; 2008 Mar; 132(1-2):229-36. PubMed ID: 18178282
[TBL] [Abstract][Full Text] [Related]
35. Whole-gene positive selection, elevated synonymous substitution rates, duplication, and indel evolution of the chloroplast clpP1 gene.
Erixon P; Oxelman B
PLoS One; 2008 Jan; 3(1):e1386. PubMed ID: 18167545
[TBL] [Abstract][Full Text] [Related]
36. Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remanei.
Cutter AD; Charlesworth B
Curr Biol; 2006 Oct; 16(20):2053-7. PubMed ID: 17055986
[TBL] [Abstract][Full Text] [Related]
37. Mutational Signatures Are Critical for Proper Estimation of Purifying Selection Pressures in Cancer Somatic Mutation Data When Using the dN/dS Metric.
Van den Eynden J; Larsson E
Front Genet; 2017; 8():74. PubMed ID: 28642787
[TBL] [Abstract][Full Text] [Related]
38. Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.
Yang Z; Nielsen R
Mol Biol Evol; 2002 Jun; 19(6):908-17. PubMed ID: 12032247
[TBL] [Abstract][Full Text] [Related]
39. d
Gu X
J Mol Evol; 2022 Oct; 90(5):342-351. PubMed ID: 35920867
[TBL] [Abstract][Full Text] [Related]
40. Evolutionary Shortcuts via Multinucleotide Substitutions and Their Impact on Natural Selection Analyses.
Lucaci AG; Zehr JD; Enard D; Thornton JW; Kosakovsky Pond SL
Mol Biol Evol; 2023 Jul; 40(7):. PubMed ID: 37395787
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]