113 related articles for article (PubMed ID: 20305737)
1. Singular Value Decomposition-based Alternative Splicing Detection.
Hu J; He X; Cote GJ; Krahe R
J Am Stat Assoc; 2009 Sep; 104(487):944-953. PubMed ID: 20305737
[TBL] [Abstract][Full Text] [Related]
2. MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays.
Xing Y; Stoilov P; Kapur K; Han A; Jiang H; Shen S; Black DL; Wong WH
RNA; 2008 Aug; 14(8):1470-9. PubMed ID: 18566192
[TBL] [Abstract][Full Text] [Related]
3. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
Ha KCh; Coulombe-Huntington J; Majewski J
BMC Genomics; 2009 Nov; 10():519. PubMed ID: 19909511
[TBL] [Abstract][Full Text] [Related]
4. RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays.
Seok J; Xu W; Davis RW; Xiao W
Sci Rep; 2015 Jul; 5():11917. PubMed ID: 26145443
[TBL] [Abstract][Full Text] [Related]
5. FIRMA: a method for detection of alternative splicing from exon array data.
Purdom E; Simpson KM; Robinson MD; Conboy JG; Lapuk AV; Speed TP
Bioinformatics; 2008 Aug; 24(15):1707-14. PubMed ID: 18573797
[TBL] [Abstract][Full Text] [Related]
6. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
Shen S; Warzecha CC; Carstens RP; Xing Y
Bioinformatics; 2010 Jan; 26(2):268-9. PubMed ID: 19933160
[TBL] [Abstract][Full Text] [Related]
7. Overestimation of alternative splicing caused by variable probe characteristics in exon arrays.
Gaidatzis D; Jacobeit K; Oakeley EJ; Stadler MB
Nucleic Acids Res; 2009 Sep; 37(16):e107. PubMed ID: 19528075
[TBL] [Abstract][Full Text] [Related]
8. EventPointer: an effective identification of alternative splicing events using junction arrays.
Romero JP; Muniategui A; De Miguel FJ; Aramburu A; Montuenga L; Pio R; Rubio A
BMC Genomics; 2016 Jun; 17():467. PubMed ID: 27315794
[TBL] [Abstract][Full Text] [Related]
9. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
Bemmo A; Benovoy D; Kwan T; Gaffney DJ; Jensen RV; Majewski J
BMC Genomics; 2008 Nov; 9():529. PubMed ID: 18990248
[TBL] [Abstract][Full Text] [Related]
10. High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity.
Zhou W; Calciano MA; Jordan H; Brenner M; Johnson S; Wu D; Lei L; Pallares D; Beurdeley P; Rouet F; Gill PS; Bracco L; Soucaille C; Einstein R
BMC Genet; 2009 Oct; 10():63. PubMed ID: 19804644
[TBL] [Abstract][Full Text] [Related]
11. A Star Sensor On-Orbit Calibration Method Based on Singular Value Decomposition.
Wu L; Xu Q; Heikkilä J; Zhao Z; Liu L; Niu AY
Sensors (Basel); 2019 Jul; 19(15):. PubMed ID: 31357554
[TBL] [Abstract][Full Text] [Related]
12. Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm.
Romero JP; Ortiz-Estévez M; Muniategui A; Carrancio S; de Miguel FJ; Carazo F; Montuenga LM; Loos R; Pío R; Trotter MWB; Rubio A
BMC Genomics; 2018 Sep; 19(1):703. PubMed ID: 30253752
[TBL] [Abstract][Full Text] [Related]
13. High-throughput alternative splicing detection using dually constrained correspondence analysis (DCCA).
Baty F; Klingbiel D; Zappa F; Brutsche M
J Biomed Inform; 2015 Dec; 58():175-185. PubMed ID: 26483173
[TBL] [Abstract][Full Text] [Related]
14. Differential splicing using whole-transcript microarrays.
Robinson MD; Speed TP
BMC Bioinformatics; 2009 May; 10():156. PubMed ID: 19463149
[TBL] [Abstract][Full Text] [Related]
15. Probe-level estimation improves the detection of differential splicing in Affymetrix exon array studies.
Laajala E; Aittokallio T; Lahesmaa R; Elo LL
Genome Biol; 2009; 10(7):R77. PubMed ID: 19607685
[TBL] [Abstract][Full Text] [Related]
16. easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.
Chang TY; Li YY; Jen CH; Yang TP; Lin CH; Hsu MT; Wang HW
BMC Bioinformatics; 2008 Oct; 9():432. PubMed ID: 18851762
[TBL] [Abstract][Full Text] [Related]
17. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
Gardina PJ; Clark TA; Shimada B; Staples MK; Yang Q; Veitch J; Schweitzer A; Awad T; Sugnet C; Dee S; Davies C; Williams A; Turpaz Y
BMC Genomics; 2006 Dec; 7():325. PubMed ID: 17192196
[TBL] [Abstract][Full Text] [Related]
18. Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays.
Qu Y; He F; Chen Y
BMC Bioinformatics; 2010 Apr; 11():211. PubMed ID: 20426803
[TBL] [Abstract][Full Text] [Related]
19. Identification of alternative splicing events regulated by an Arabidopsis serine/arginine-like protein, atSR45a, in response to high-light stress using a tiling array.
Yoshimura K; Mori T; Yokoyama K; Koike Y; Tanabe N; Sato N; Takahashi H; Maruta T; Shigeoka S
Plant Cell Physiol; 2011 Oct; 52(10):1786-805. PubMed ID: 21862516
[TBL] [Abstract][Full Text] [Related]
20. Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays.
Della Beffa C; Cordero F; Calogero RA
BMC Genomics; 2008 Nov; 9():571. PubMed ID: 19040723
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]