252 related articles for article (PubMed ID: 20350613)
1. Identification of modules in Aspergillus niger by gene co-expression network analysis.
van den Berg RA; Braaksma M; van der Veen D; van der Werf MJ; Punt PJ; van der Oost J; de Graaff LH
Fungal Genet Biol; 2010 Jun; 47(6):539-50. PubMed ID: 20350613
[TBL] [Abstract][Full Text] [Related]
2. Characterization of the Aspergillus niger prtT, a unique regulator of extracellular protease encoding genes.
Punt PJ; Schuren FH; Lehmbeck J; Christensen T; Hjort C; van den Hondel CA
Fungal Genet Biol; 2008 Dec; 45(12):1591-9. PubMed ID: 18930158
[TBL] [Abstract][Full Text] [Related]
3. Identification of regulatory network topological units coordinating the genome-wide transcriptional response to glucose in Escherichia coli.
Gutierrez-Ríos RM; Freyre-Gonzalez JA; Resendis O; Collado-Vides J; Saier M; Gosset G
BMC Microbiol; 2007 Jun; 7():53. PubMed ID: 17559662
[TBL] [Abstract][Full Text] [Related]
4. Transcription factor GCN4 for control of amino acid biosynthesis also regulates the expression of the gene for lipoamide dehydrogenase.
Zaman Z; Bowman SB; Kornfeld GD; Brown AJ; Dawes IW
Biochem J; 1999 Jun; 340 ( Pt 3)(Pt 3):855-62. PubMed ID: 10359673
[TBL] [Abstract][Full Text] [Related]
5. D-Serine exposure resulted in gene expression changes indicative of activation of fibrogenic pathways and down-regulation of energy metabolism and oxidative stress response.
Soto A; DelRaso NJ; Schlager JJ; Chan VT
Toxicology; 2008 Jan; 243(1-2):177-92. PubMed ID: 18061331
[TBL] [Abstract][Full Text] [Related]
6. Integrating genomic data to predict transcription factor binding.
Holloway DT; Kon M; DeLisi C
Genome Inform; 2005; 16(1):83-94. PubMed ID: 16362910
[TBL] [Abstract][Full Text] [Related]
7. Analysis of genome-wide coexpression and coevolution of Aspergillus oryzae and Aspergillus niger.
Vongsangnak W; Nookaew I; Salazar M; Nielsen J
OMICS; 2010 Apr; 14(2):165-75. PubMed ID: 20337533
[TBL] [Abstract][Full Text] [Related]
8. Regulation of the alpha-glucuronidase-encoding gene ( aguA) from Aspergillus niger.
de Vries RP; van de Vondervoort PJ; Hendriks L; van de Belt M; Visser J
Mol Genet Genomics; 2002 Sep; 268(1):96-102. PubMed ID: 12242504
[TBL] [Abstract][Full Text] [Related]
9. Transcriptional regulation of the Antifungal Protein in Aspergillus giganteus.
Meyer V; Wedde M; Stahl U
Mol Genet Genomics; 2002 Jan; 266(5):747-57. PubMed ID: 11810248
[TBL] [Abstract][Full Text] [Related]
10. Statistical methods in integrative analysis for gene regulatory modules.
Zeng L; Wu J; Xie J
Stat Appl Genet Mol Biol; 2008; 7(1):Article 28. PubMed ID: 18976224
[TBL] [Abstract][Full Text] [Related]
11. Comprehensive search for HNF-1beta-regulated genes in mouse hepatoma cells perturbed by transcription regulatory factor-targeted RNAi.
Tanaka T; Tomaru Y; Nomura Y; Miura H; Suzuki M; Hayashizaki Y
Nucleic Acids Res; 2004; 32(9):2740-50. PubMed ID: 15148361
[TBL] [Abstract][Full Text] [Related]
12. D-Serine exposure resulted in gene expression changes implicated in neurodegenerative disorders and neuronal dysfunction in male Fischer 344 rats.
Davidson ME; Kerepesi LA; Soto A; Chan VT
Arch Toxicol; 2009 Aug; 83(8):747-62. PubMed ID: 19212759
[TBL] [Abstract][Full Text] [Related]
13. Functional analysis of alcS, a gene of the alc cluster in Aspergillus nidulans.
Flipphi M; Robellet X; Dequier E; Leschelle X; Felenbok B; Vélot C
Fungal Genet Biol; 2006 Apr; 43(4):247-60. PubMed ID: 16531087
[TBL] [Abstract][Full Text] [Related]
14. Modularity of the transcriptional response of protein complexes in yeast.
Simonis N; Gonze D; Orsi C; van Helden J; Wodak SJ
J Mol Biol; 2006 Oct; 363(2):589-610. PubMed ID: 16973176
[TBL] [Abstract][Full Text] [Related]
15. Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.
Kim SY; Kim Y
BMC Bioinformatics; 2006 Jul; 7():330. PubMed ID: 16817975
[TBL] [Abstract][Full Text] [Related]
16. The interaction of induction and repression mechanisms in the regulation of galacturonic acid-induced genes in Aspergillus niger.
Niu J; Homan TG; Arentshorst M; de Vries RP; Visser J; Ram AF
Fungal Genet Biol; 2015 Sep; 82():32-42. PubMed ID: 26127014
[TBL] [Abstract][Full Text] [Related]
17. Characterization of the Far Transcription Factor Family in Aspergillus flavus.
Luo X; Affeldt KJ; Keller NP
G3 (Bethesda); 2016 Oct; 6(10):3269-3281. PubMed ID: 27534569
[TBL] [Abstract][Full Text] [Related]
18. Identification of Mxr1p-binding sites in the promoters of genes encoding dihydroxyacetone synthase and peroxin 8 of the methylotrophic yeast Pichia pastoris.
Kranthi BV; Kumar HR; Rangarajan PN
Yeast; 2010 Sep; 27(9):705-11. PubMed ID: 20198661
[TBL] [Abstract][Full Text] [Related]
19. GalX regulates the D-galactose oxido-reductive pathway in Aspergillus niger.
Gruben BS; Zhou M; de Vries RP
FEBS Lett; 2012 Nov; 586(22):3980-5. PubMed ID: 23063944
[TBL] [Abstract][Full Text] [Related]
20. Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrepresented upstream motifs.
Corà D; Di Cunto F; Provero P; Silengo L; Caselle M
BMC Bioinformatics; 2004 May; 5():57. PubMed ID: 15137914
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]