These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

104 related articles for article (PubMed ID: 20377443)

  • 1. Topology-free querying of protein interaction networks.
    Bruckner S; Hüffner F; Karp RM; Shamir R; Sharan R
    J Comput Biol; 2010 Mar; 17(3):237-52. PubMed ID: 20377443
    [TBL] [Abstract][Full Text] [Related]  

  • 2. QNet: a tool for querying protein interaction networks.
    Dost B; Shlomi T; Gupta N; Ruppin E; Bafna V; Sharan R
    J Comput Biol; 2008 Sep; 15(7):913-25. PubMed ID: 18707533
    [TBL] [Abstract][Full Text] [Related]  

  • 3. TORQUE: topology-free querying of protein interaction networks.
    Bruckner S; Hüffner F; Karp RM; Shamir R; Sharan R
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W106-8. PubMed ID: 19491310
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CUFID-query: accurate network querying through random walk based network flow estimation.
    Jeong H; Qian X; Yoon BJ
    BMC Bioinformatics; 2017 Dec; 18(Suppl 14):500. PubMed ID: 29297279
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Querying graphs in protein-protein interactions networks using feedback vertex set.
    Blin G; Sikora F; Vialette S
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(4):628-35. PubMed ID: 20498512
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RESQUE: network reduction using semi-Markov random walk scores for efficient querying of biological networks.
    Sahraeian SM; Yoon BJ
    Bioinformatics; 2012 Aug; 28(16):2129-36. PubMed ID: 22730436
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An efficient network querying method based on conditional random fields.
    Huang Q; Wu LY; Zhang XS
    Bioinformatics; 2011 Nov; 27(22):3173-8. PubMed ID: 21926127
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
    Alkan F; Erten C
    Bioinformatics; 2017 Feb; 33(4):537-544. PubMed ID: 27797764
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SEQUOIA: significance enhanced network querying through context-sensitive random walk and minimization of network conductance.
    Jeong H; Yoon BJ
    BMC Syst Biol; 2017 Mar; 11(Suppl 3):20. PubMed ID: 28361708
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Global alignment of multiple protein interaction networks.
    Singh R; Xu J; Berger B
    Pac Symp Biocomput; 2008; ():303-14. PubMed ID: 18229695
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Topology-function conservation in protein-protein interaction networks.
    Davis D; Yaveroğlu ÖN; Malod-Dognin N; Stojmirovic A; Pržulj N
    Bioinformatics; 2015 May; 31(10):1632-9. PubMed ID: 25609797
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J; Song B; Hu X; Yan F; Wang J
    BMC Bioinformatics; 2018 Aug; 19(Suppl 9):286. PubMed ID: 30367584
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Algorithms for Regular Tree Grammar Network Search and Their Application to Mining Human-viral Infection Patterns.
    Smoly I; Carmel A; Shemer-Avni Y; Yeger-Lotem E; Ziv-Ukelson M
    J Comput Biol; 2016 Mar; 23(3):165-79. PubMed ID: 26953875
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Global alignment of protein-protein interaction networks.
    Mongiovì M; Sharan R
    Methods Mol Biol; 2013; 939():21-34. PubMed ID: 23192538
    [TBL] [Abstract][Full Text] [Related]  

  • 15. QPath: a method for querying pathways in a protein-protein interaction network.
    Shlomi T; Segal D; Ruppin E; Sharan R
    BMC Bioinformatics; 2006 Apr; 7():199. PubMed ID: 16606460
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Functional centrality: detecting lethality of proteins in protein interaction networks.
    Tew KL; Li XL; Tan SH
    Genome Inform; 2007; 19():166-77. PubMed ID: 18546514
    [TBL] [Abstract][Full Text] [Related]  

  • 17. iPoint: an integer programming based algorithm for inferring protein subnetworks.
    Atias N; Sharan R
    Mol Biosyst; 2013 Jul; 9(7):1662-9. PubMed ID: 23385645
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S; Ning X; Zhang XS
    Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Efficient algorithms for detecting signaling pathways in protein interaction networks.
    Scott J; Ideker T; Karp RM; Sharan R
    J Comput Biol; 2006 Mar; 13(2):133-44. PubMed ID: 16597231
    [TBL] [Abstract][Full Text] [Related]  

  • 20. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V; Pržulj N
    Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.