BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

161 related articles for article (PubMed ID: 20401944)

  • 1. SIGMA: a set-cover-based inexact graph matching algorithm.
    Mongiovì M; Di Natale R; Giugno R; Pulvirenti A; Ferro A; Sharan R
    J Bioinform Comput Biol; 2010 Apr; 8(2):199-218. PubMed ID: 20401944
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SING: subgraph search in non-homogeneous graphs.
    Di Natale R; Ferro A; Giugno R; Mongiovì M; Pulvirenti A; Shasha D
    BMC Bioinformatics; 2010 Feb; 11():96. PubMed ID: 20170516
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Top-k similar graph matching using TraM in biological networks.
    Amin MS; Finley RL; Jamil HM
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1790-804. PubMed ID: 22732692
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SAGA: a subgraph matching tool for biological graphs.
    Tian Y; McEachin RC; Santos C; States DJ; Patel JM
    Bioinformatics; 2007 Jan; 23(2):232-9. PubMed ID: 17110368
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Learning graph matching.
    Caetano TS; McAuley JJ; Cheng L; Le QV; Smola AJ
    IEEE Trans Pattern Anal Mach Intell; 2009 Jun; 31(6):1048-58. PubMed ID: 19372609
    [TBL] [Abstract][Full Text] [Related]  

  • 6. GRAPES-DD: exploiting decision diagrams for index-driven search in biological graph databases.
    Licheri N; Bonnici V; Beccuti M; Giugno R
    BMC Bioinformatics; 2021 Apr; 22(1):209. PubMed ID: 33888059
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A (sub)graph isomorphism algorithm for matching large graphs.
    Cordella LP; Foggia P; Sansone C; Vento M
    IEEE Trans Pattern Anal Mach Intell; 2004 Oct; 26(10):1367-72. PubMed ID: 15641723
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Revealing biological modules via graph summarization.
    Navlakha S; Schatz MC; Kingsford C
    J Comput Biol; 2009 Feb; 16(2):253-64. PubMed ID: 19183002
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Discovering large conserved functional components in global network alignment by graph matching.
    Zhu Y; Li Y; Liu J; Qin L; Yu JX
    BMC Genomics; 2018 Sep; 19(Suppl 7):670. PubMed ID: 30255780
    [TBL] [Abstract][Full Text] [Related]  

  • 10. An novel frequent probability pattern mining algorithm based on circuit simulation method in uncertain biological networks.
    He J; Wang C; Qiu K; Zhong W
    BMC Syst Biol; 2014; 8 Suppl 3(Suppl 3):S6. PubMed ID: 25350277
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Application of kernel functions for accurate similarity search in large chemical databases.
    Wang X; Huan J; Smalter A; Lushington GH
    BMC Bioinformatics; 2010 Apr; 11 Suppl 3(Suppl 3):S8. PubMed ID: 20438655
    [TBL] [Abstract][Full Text] [Related]  

  • 12. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N; Pržulj N
    Bioinformatics; 2015 Jul; 31(13):2182-9. PubMed ID: 25725498
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Algorithms for effective querying of compound graph-based pathway databases.
    Dogrusoz U; Cetintas A; Demir E; Babur O
    BMC Bioinformatics; 2009 Nov; 10():376. PubMed ID: 19917102
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Parameterized algorithmics for finding connected motifs in biological networks.
    Betzler N; van Bevern R; Fellows MR; Komusiewicz C; Niedermeier R
    IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(5):1296-308. PubMed ID: 21282862
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Subgraph queries by context-free grammars.
    Sevon P; Eronen L
    J Integr Bioinform; 2008 Aug; 5(2):. PubMed ID: 20134073
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Approximate Graph Edit Distance in Quadratic Time.
    Riesen K; Ferrer M; Bunke H
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(2):483-494. PubMed ID: 26390496
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mining coherent dense subgraphs across massive biological networks for functional discovery.
    Hu H; Yan X; Huang Y; Han J; Zhou XJ
    Bioinformatics; 2005 Jun; 21 Suppl 1():i213-21. PubMed ID: 15961460
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Motif discovery in biological network using expansion tree.
    Patra S; Mohapatra A
    J Bioinform Comput Biol; 2018 Dec; 16(6):1850024. PubMed ID: 30415600
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Graphical models and point pattern matching.
    Caetano TS; Caelli T; Schuurmans D; Barone DA
    IEEE Trans Pattern Anal Mach Intell; 2006 Oct; 28(10):1646-63. PubMed ID: 16986545
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An eigenspace projection clustering method for inexact graph matching.
    Caelli T; Kosinov S
    IEEE Trans Pattern Anal Mach Intell; 2004 Apr; 26(4):515-9. PubMed ID: 15382655
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.