These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 20412592)

  • 1. Conditional random pattern model for copy number aberration detection.
    Li F; Zhou X; Huang W; Chang CC; Wong ST
    BMC Bioinformatics; 2010 Apr; 11():200. PubMed ID: 20412592
    [TBL] [Abstract][Full Text] [Related]  

  • 2. TAFFYS: An Integrated Tool for Comprehensive Analysis of Genomic Aberrations in Tumor Samples.
    Liu Y; Li A; Feng H; Wang M
    PLoS One; 2015; 10(6):e0129835. PubMed ID: 26111017
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array.
    Yu T; Ye H; Sun W; Li KC; Chen Z; Jacobs S; Bailey DK; Wong DT; Zhou X
    BMC Bioinformatics; 2007 May; 8():145. PubMed ID: 17477871
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays.
    Huang MC; Chuang TP; Chen CH; Wu JY; Chen YT; Li LH; Yang HC
    BMC Genomics; 2016 Mar; 17():266. PubMed ID: 27029637
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Combined array-comparative genomic hybridization and single-nucleotide polymorphism-loss of heterozygosity analysis reveals complex genetic alterations in cervical cancer.
    Kloth JN; Oosting J; van Wezel T; Szuhai K; Knijnenburg J; Gorter A; Kenter GG; Fleuren GJ; Jordanova ES
    BMC Genomics; 2007 Feb; 8():53. PubMed ID: 17311676
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A novel SNP analysis method to detect copy number alterations with an unbiased reference signal directly from tumor samples.
    Lisovich A; Chandran UR; Lyons-Weiler MA; LaFramboise WA; Brown AR; Jakacki RI; Pollack IF; Sobol RW
    BMC Med Genomics; 2011 Jan; 4():14. PubMed ID: 21269491
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Integrated analysis of copy number alteration and RNA expression profiles of cancer using a high-resolution whole-genome oligonucleotide array.
    Jung SH; Shin SH; Yim SH; Choi HS; Lee SH; Chung YJ
    Exp Mol Med; 2009 Jul; 41(7):462-70. PubMed ID: 19322034
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data.
    Cao Q; Zhou M; Wang X; Meyer CA; Zhang Y; Chen Z; Li C; Liu XS
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D968-74. PubMed ID: 20972221
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Distinguishing somatic and germline copy number events in cancer patient DNA hybridized to whole-genome SNP genotyping arrays.
    Ha G; Shah S
    Methods Mol Biol; 2013; 973():355-72. PubMed ID: 23412801
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CNApp, a tool for the quantification of copy number alterations and integrative analysis revealing clinical implications.
    Franch-Expósito S; Bassaganyas L; Vila-Casadesús M; Hernández-Illán E; Esteban-Fabró R; Díaz-Gay M; Lozano JJ; Castells A; Llovet JM; Castellví-Bel S; Camps J
    Elife; 2020 Jan; 9():. PubMed ID: 31939734
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data.
    Baross A; Delaney AD; Li HI; Nayar T; Flibotte S; Qian H; Chan SY; Asano J; Ally A; Cao M; Birch P; Brown-John M; Fernandes N; Go A; Kennedy G; Langlois S; Eydoux P; Friedman JM; Marra MA
    BMC Bioinformatics; 2007 Oct; 8():368. PubMed ID: 17910767
    [TBL] [Abstract][Full Text] [Related]  

  • 12. BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data.
    Yu G; Zhang B; Bova GS; Xu J; Shih IeM; Wang Y
    Bioinformatics; 2011 Jun; 27(11):1473-80. PubMed ID: 21498400
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Computational methods for identification of recurrent copy number alteration patterns by array CGH.
    Shah SP
    Cytogenet Genome Res; 2008; 123(1-4):343-51. PubMed ID: 19287173
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Single-cell copy number variation detection.
    Cheng J; Vanneste E; Konings P; Voet T; Vermeesch JR; Moreau Y
    Genome Biol; 2011 Aug; 12(8):R80. PubMed ID: 21854607
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detection of DNA copy number alterations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometric analysis of single nucleotide polymorphisms.
    Jin S; Huang D; Jin W; Wang Y; Shao H; Gong L; Luo Z; Yang Z; Luan J; Xie D; Ding C
    Clin Chem Lab Med; 2022 Sep; 60(10):1543-1550. PubMed ID: 35938948
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Precise inference of copy number alterations in tumor samples from SNP arrays.
    Chen GK; Chang X; Curtis C; Wang K
    Bioinformatics; 2013 Dec; 29(23):2964-70. PubMed ID: 24021380
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes.
    Khalil AIS; Khyriem C; Chattopadhyay A; Sanyal A
    BMC Bioinformatics; 2020 Apr; 21(1):147. PubMed ID: 32299346
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Copy Number Variation Analysis by Array Analysis of Single Cells Following Whole Genome Amplification.
    Dimitriadou E; Zamani Esteki M; Vermeesch JR
    Methods Mol Biol; 2015; 1347():197-219. PubMed ID: 26374319
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CNAnova: a new approach for finding recurrent copy number abnormalities in cancer SNP microarray data.
    Ivakhno S; Tavaré S
    Bioinformatics; 2010 Jun; 26(11):1395-402. PubMed ID: 20403815
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Acquired copy number alterations in adult acute myeloid leukemia genomes.
    Walter MJ; Payton JE; Ries RE; Shannon WD; Deshmukh H; Zhao Y; Baty J; Heath S; Westervelt P; Watson MA; Tomasson MH; Nagarajan R; O'Gara BP; Bloomfield CD; Mrózek K; Selzer RR; Richmond TA; Kitzman J; Geoghegan J; Eis PS; Maupin R; Fulton RS; McLellan M; Wilson RK; Mardis ER; Link DC; Graubert TA; DiPersio JF; Ley TJ
    Proc Natl Acad Sci U S A; 2009 Aug; 106(31):12950-5. PubMed ID: 19651600
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.