These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

401 related articles for article (PubMed ID: 20472542)

  • 1. The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell.
    Junier T; Zdobnov EM
    Bioinformatics; 2010 Jul; 26(13):1669-70. PubMed ID: 20472542
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines.
    Hernández Y; Bernstein R; Pagan P; Vargas L; McCaig W; Ramrattan G; Akther S; Larracuente A; Di L; Vieira FG; Qiu WG
    BMC Bioinformatics; 2018 Mar; 19(1):76. PubMed ID: 29499649
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DendroPy: a Python library for phylogenetic computing.
    Sukumaran J; Holder MT
    Bioinformatics; 2010 Jun; 26(12):1569-71. PubMed ID: 20421198
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Drawing phylogenetic trees in LATEX and Microsoft Word.
    Savva G; Conn J; Dicks J
    Bioinformatics; 2004 Sep; 20(14):2322-3. PubMed ID: 15059821
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A novel algorithm and web-based tool for comparing two alternative phylogenetic trees.
    Nye TM; Liò P; Gilks WR
    Bioinformatics; 2006 Jan; 22(1):117-9. PubMed ID: 16234319
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Nexplorer: phylogeny-based exploration of sequence family data.
    Gopalan V; Qiu WG; Chen MZ; Stoltzfus A
    Bioinformatics; 2006 Jan; 22(1):120-1. PubMed ID: 16267087
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Phybase: an R package for species tree analysis.
    Liu L; Yu L
    Bioinformatics; 2010 Apr; 26(7):962-3. PubMed ID: 20156990
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CAPS: coevolution analysis using protein sequences.
    Fares MA; McNally D
    Bioinformatics; 2006 Nov; 22(22):2821-2. PubMed ID: 17005535
    [TBL] [Abstract][Full Text] [Related]  

  • 9. GenomeDiagram: a python package for the visualization of large-scale genomic data.
    Pritchard L; White JA; Birch PR; Toth IK
    Bioinformatics; 2006 Mar; 22(5):616-7. PubMed ID: 16377612
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Madeline 2.0 PDE: a new program for local and web-based pedigree drawing.
    Trager EH; Khanna R; Marrs A; Siden L; Branham KE; Swaroop A; Richards JE
    Bioinformatics; 2007 Jul; 23(14):1854-6. PubMed ID: 17488757
    [TBL] [Abstract][Full Text] [Related]  

  • 11. BuddySuite: Command-Line Toolkits for Manipulating Sequences, Alignments, and Phylogenetic Trees.
    Bond SR; Keat KE; Barreira SN; Baxevanis AD
    Mol Biol Evol; 2017 Jun; 34(6):1543-1546. PubMed ID: 28333216
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DLRS: gene tree evolution in light of a species tree.
    Sjöstrand J; Sennblad B; Arvestad L; Lagergren J
    Bioinformatics; 2012 Nov; 28(22):2994-5. PubMed ID: 22982573
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Dalliance: interactive genome viewing on the web.
    Down TA; Piipari M; Hubbard TJ
    Bioinformatics; 2011 Mar; 27(6):889-90. PubMed ID: 21252075
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Unix Survival Guide.
    Stein LD
    Curr Protoc Bioinformatics; 2015 Sep; 51():A1.C.1-A1.C.27. PubMed ID: 26334925
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A format for phylogenetic placements.
    Matsen FA; Hoffman NG; Gallagher A; Stamatakis A
    PLoS One; 2012; 7(2):e31009. PubMed ID: 22383988
    [TBL] [Abstract][Full Text] [Related]  

  • 16. geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees.
    Pennell MW; Eastman JM; Slater GJ; Brown JW; Uyeda JC; FitzJohn RG; Alfaro ME; Harmon LJ
    Bioinformatics; 2014 Aug; 30(15):2216-8. PubMed ID: 24728855
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ETE: a python Environment for Tree Exploration.
    Huerta-Cepas J; Dopazo J; Gabaldón T
    BMC Bioinformatics; 2010 Jan; 11():24. PubMed ID: 20070885
    [TBL] [Abstract][Full Text] [Related]  

  • 18. NAViGaTOR: Network Analysis, Visualization and Graphing Toronto.
    Brown KR; Otasek D; Ali M; McGuffin MJ; Xie W; Devani B; Toch IL; Jurisica I
    Bioinformatics; 2009 Dec; 25(24):3327-9. PubMed ID: 19837718
    [TBL] [Abstract][Full Text] [Related]  

  • 19. kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome.
    Gardner SN; Slezak T; Hall BG
    Bioinformatics; 2015 Sep; 31(17):2877-8. PubMed ID: 25913206
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PhyloDraw: a phylogenetic tree drawing system.
    Choi JH; Jung HY; Kim HS; Cho HG
    Bioinformatics; 2000 Nov; 16(11):1056-8. PubMed ID: 11159323
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.