These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
6. Using median sets for inferring phylogenetic trees. Bernt M; Merkle D; Middendorf M Bioinformatics; 2007 Jan; 23(2):e129-35. PubMed ID: 17237080 [TBL] [Abstract][Full Text] [Related]
7. Reconstruction of ancestral genomic sequences using likelihood. Elias I; Tuller T J Comput Biol; 2007 Mar; 14(2):216-37. PubMed ID: 17456016 [TBL] [Abstract][Full Text] [Related]
8. MSMAD: a computationally efficient method for the analysis of noisy array CGH data. Budinska E; Gelnarova E; Schimek MG Bioinformatics; 2009 Mar; 25(6):703-13. PubMed ID: 19147666 [TBL] [Abstract][Full Text] [Related]
9. A fast and flexible approach to oligonucleotide probe design for genomes and gene families. Feng S; Tillier ER Bioinformatics; 2007 May; 23(10):1195-202. PubMed ID: 17392329 [TBL] [Abstract][Full Text] [Related]
10. Fuzzy-adaptive-thresholding-based exon prediction. Agrawal A; Mittal A; Jain R; Takkar R Int J Comput Biol Drug Des; 2010; 3(4):311-33. PubMed ID: 21297230 [TBL] [Abstract][Full Text] [Related]
11. bPeaks: a bioinformatics tool to detect transcription factor binding sites from ChIPseq data in yeasts and other organisms with small genomes. Merhej J; Frigo A; Le Crom S; Camadro JM; Devaux F; Lelandais G Yeast; 2014 Oct; 31(10):375-91. PubMed ID: 25041923 [TBL] [Abstract][Full Text] [Related]
12. Accurate identification of orthologous segments among multiple genomes. Hachiya T; Osana Y; Popendorf K; Sakakibara Y Bioinformatics; 2009 Apr; 25(7):853-60. PubMed ID: 19188192 [TBL] [Abstract][Full Text] [Related]
13. Biological network mapping and source signal deduction. Brynildsen MP; Wu TY; Jang SS; Liao JC Bioinformatics; 2007 Jul; 23(14):1783-91. PubMed ID: 17495996 [TBL] [Abstract][Full Text] [Related]
14. Fast model-based protein homology detection without alignment. Hochreiter S; Heusel M; Obermayer K Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755 [TBL] [Abstract][Full Text] [Related]
15. A new method to measure the semantic similarity of GO terms. Wang JZ; Du Z; Payattakool R; Yu PS; Chen CF Bioinformatics; 2007 May; 23(10):1274-81. PubMed ID: 17344234 [TBL] [Abstract][Full Text] [Related]
16. Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae. Morris RT; O'Connor TR; Wyrick JJ Bioinformatics; 2010 Jan; 26(2):168-74. PubMed ID: 19959498 [TBL] [Abstract][Full Text] [Related]
17. VSDocker: a tool for parallel high-throughput virtual screening using AutoDock on Windows-based computer clusters. Prakhov ND; Chernorudskiy AL; Gainullin MR Bioinformatics; 2010 May; 26(10):1374-5. PubMed ID: 20378556 [TBL] [Abstract][Full Text] [Related]