These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

169 related articles for article (PubMed ID: 20483918)

  • 41. Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology.
    Karp PD; Latendresse M; Paley SM; Krummenacker M; Ong QD; Billington R; Kothari A; Weaver D; Lee T; Subhraveti P; Spaulding A; Fulcher C; Keseler IM; Caspi R
    Brief Bioinform; 2016 Sep; 17(5):877-90. PubMed ID: 26454094
    [TBL] [Abstract][Full Text] [Related]  

  • 42. ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis.
    Pitkänen E; Akerlund A; Rantanen A; Jouhten P; Ukkonen E
    J Integr Bioinform; 2008 Aug; 5(2):. PubMed ID: 20134058
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Grid-based computational methods for the design of constraint-based parsimonious chemical reaction networks to simulate metabolite production: GridProd.
    Tamura T
    BMC Bioinformatics; 2018 Sep; 19(1):325. PubMed ID: 30217144
    [TBL] [Abstract][Full Text] [Related]  

  • 44. MetaboAnnotator: an efficient toolbox to annotate metabolites in genome-scale metabolic reconstructions.
    Thiele I; Preciat G; Fleming RMT
    Bioinformatics; 2022 Oct; 38(20):4831-4832. PubMed ID: 36047841
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Biological Network Inference and analysis using SEBINI and CABIN.
    Taylor R; Singhal M
    Methods Mol Biol; 2009; 541():551-76. PubMed ID: 19381531
    [TBL] [Abstract][Full Text] [Related]  

  • 46. BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions.
    Schellenberger J; Park JO; Conrad TM; Palsson BØ
    BMC Bioinformatics; 2010 Apr; 11():213. PubMed ID: 20426874
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Effect of carbon source perturbations on transcriptional regulation of metabolic fluxes in Saccharomyces cerevisiae.
    Cakir T; Kirdar B; Onsan ZI; Ulgen KO; Nielsen J
    BMC Syst Biol; 2007 Mar; 1():18. PubMed ID: 17408508
    [TBL] [Abstract][Full Text] [Related]  

  • 48. GEMSiRV: a software platform for GEnome-scale metabolic model simulation, reconstruction and visualization.
    Liao YC; Tsai MH; Chen FC; Hsiung CA
    Bioinformatics; 2012 Jul; 28(13):1752-8. PubMed ID: 22563070
    [TBL] [Abstract][Full Text] [Related]  

  • 49. rMTA: robust metabolic transformation analysis.
    Valcárcel LV; Torrano V; Tobalina L; Carracedo A; Planes FJ
    Bioinformatics; 2019 Nov; 35(21):4350-4355. PubMed ID: 30923806
    [TBL] [Abstract][Full Text] [Related]  

  • 50. TNF-alpha regulates alternative splicing of genes participating in pathways of crucial metabolic syndromes; a transcriptome wide study.
    Louis JM; Vaz C; Balaji A; Tanavde V; Talukdar I
    Cytokine; 2020 Jan; 125():154815. PubMed ID: 31476685
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Genome-scale in silico aided metabolic analysis and flux comparisons of Escherichia coli to improve succinate production.
    Wang Q; Chen X; Yang Y; Zhao X
    Appl Microbiol Biotechnol; 2006 Dec; 73(4):887-94. PubMed ID: 16927085
    [TBL] [Abstract][Full Text] [Related]  

  • 52. GAM: a web-service for integrated transcriptional and metabolic network analysis.
    Sergushichev AA; Loboda AA; Jha AK; Vincent EE; Driggers EM; Jones RG; Pearce EJ; Artyomov MN
    Nucleic Acids Res; 2016 Jul; 44(W1):W194-200. PubMed ID: 27098040
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Discovering missing reactions of metabolic networks by using gene co-expression data.
    Hosseini Z; Marashi SA
    Sci Rep; 2017 Feb; 7():41774. PubMed ID: 28150713
    [TBL] [Abstract][Full Text] [Related]  

  • 54. CRA toolbox: software package for conditional robustness analysis of cancer systems biology models in MATLAB.
    Bianconi F; Antonini C; Tomassoni L; Valigi P
    BMC Bioinformatics; 2019 Jul; 20(1):385. PubMed ID: 31288758
    [TBL] [Abstract][Full Text] [Related]  

  • 55. SWIFTCORE: a tool for the context-specific reconstruction of genome-scale metabolic networks.
    Tefagh M; Boyd SP
    BMC Bioinformatics; 2020 Apr; 21(1):140. PubMed ID: 32293238
    [TBL] [Abstract][Full Text] [Related]  

  • 56. CellNetVis: a web tool for visualization of biological networks using force-directed layout constrained by cellular components.
    Heberle H; Carazzolle MF; Telles GP; Meirelles GV; Minghim R
    BMC Bioinformatics; 2017 Sep; 18(Suppl 10):395. PubMed ID: 28929969
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Structural and functional analysis of cellular networks with CellNetAnalyzer.
    Klamt S; Saez-Rodriguez J; Gilles ED
    BMC Syst Biol; 2007 Jan; 1():2. PubMed ID: 17408509
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data.
    Durot M; Le Fèvre F; de Berardinis V; Kreimeyer A; Vallenet D; Combe C; Smidtas S; Salanoubat M; Weissenbach J; Schachter V
    BMC Syst Biol; 2008 Oct; 2():85. PubMed ID: 18840283
    [TBL] [Abstract][Full Text] [Related]  

  • 59. OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains.
    Kim J; Reed JL
    BMC Syst Biol; 2010 Apr; 4():53. PubMed ID: 20426856
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Continuous modeling of metabolic networks with gene regulation in yeast and in vivo determination of rate parameters.
    Moisset P; Vaisman D; Cintolesi A; Urrutia J; Rapaport I; Andrews BA; Asenjo JA
    Biotechnol Bioeng; 2012 Sep; 109(9):2325-39. PubMed ID: 22447363
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.