These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

229 related articles for article (PubMed ID: 20497999)

  • 1. SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs.
    Davey NE; Haslam NJ; Shields DC; Edwards RJ
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W534-9. PubMed ID: 20497999
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SLiMSearch 2.0: biological context for short linear motifs in proteins.
    Davey NE; Haslam NJ; Shields DC; Edwards RJ
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W56-60. PubMed ID: 21622654
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The SLiMDisc server: short, linear motif discovery in proteins.
    Davey NE; Edwards RJ; Shields DC
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W455-9. PubMed ID: 17576682
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SLiMFinder: a probabilistic method for identifying over-represented, convergently evolved, short linear motifs in proteins.
    Edwards RJ; Davey NE; Shields DC
    PLoS One; 2007 Oct; 2(10):e967. PubMed ID: 17912346
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computational Prediction of Disordered Protein Motifs Using SLiMSuite.
    Edwards RJ; Paulsen K; Aguilar Gomez CM; Pérez-Bercoff Å
    Methods Mol Biol; 2020; 2141():37-72. PubMed ID: 32696352
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CompariMotif: quick and easy comparisons of sequence motifs.
    Edwards RJ; Davey NE; Shields DC
    Bioinformatics; 2008 May; 24(10):1307-9. PubMed ID: 18375965
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DILIMOT: discovery of linear motifs in proteins.
    Neduva V; Russell RB
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W350-5. PubMed ID: 16845024
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery.
    Davey NE; Shields DC; Edwards RJ
    Bioinformatics; 2009 Feb; 25(4):443-50. PubMed ID: 19136552
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks.
    Olorin E; O'Brien KT; Palopoli N; Pérez-Bercoff Å; Shields DC; Edwards RJ
    F1000Res; 2015; 4():477. PubMed ID: 26674271
    [TBL] [Abstract][Full Text] [Related]  

  • 10. HH-MOTiF: de novo detection of short linear motifs in proteins by Hidden Markov Model comparisons.
    Prytuliak R; Volkmer M; Meier M; Habermann BH
    Nucleic Acids Res; 2017 Jul; 45(W1):W470-W477. PubMed ID: 28460141
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MEME: discovering and analyzing DNA and protein sequence motifs.
    Bailey TL; Williams N; Misleh C; Li WW
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W369-73. PubMed ID: 16845028
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SCOPE: a web server for practical de novo motif discovery.
    Carlson JM; Chakravarty A; DeZiel CE; Gross RH
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W259-64. PubMed ID: 17485471
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bioinformatics Approaches for Predicting Disordered Protein Motifs.
    Bhowmick P; Guharoy M; Tompa P
    Adv Exp Med Biol; 2015; 870():291-318. PubMed ID: 26387106
    [TBL] [Abstract][Full Text] [Related]  

  • 14. STAMP: a web tool for exploring DNA-binding motif similarities.
    Mahony S; Benos PV
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W253-8. PubMed ID: 17478497
    [TBL] [Abstract][Full Text] [Related]  

  • 15. WebAllergen: a web server for predicting allergenic proteins.
    Riaz T; Hor HL; Krishnan A; Tang F; Li KB
    Bioinformatics; 2005 May; 21(10):2570-1. PubMed ID: 15746289
    [TBL] [Abstract][Full Text] [Related]  

  • 16. iELM--a web server to explore short linear motif-mediated interactions.
    Weatheritt RJ; Jehl P; Dinkel H; Gibson TJ
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W364-9. PubMed ID: 22638578
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SCANMOT: searching for similar sequences using a simultaneous scan of multiple sequence motifs.
    Chakrabarti S; Anand AP; Bhardwaj N; Pugalenthi G; Sowdhamini R
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W274-6. PubMed ID: 15980468
    [TBL] [Abstract][Full Text] [Related]  

  • 18. DRIMust: a web server for discovering rank imbalanced motifs using suffix trees.
    Leibovich L; Paz I; Yakhini Z; Mandel-Gutfreund Y
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W174-9. PubMed ID: 23685432
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SIRW: A web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches.
    Ramu C
    Nucleic Acids Res; 2003 Jul; 31(13):3771-4. PubMed ID: 12824415
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
    Ferrè F; Ponty Y; Lorenz WA; Clote P
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W659-68. PubMed ID: 17567620
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.