These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

200 related articles for article (PubMed ID: 20507908)

  • 1. iPARTS: an improved tool of pairwise alignment of RNA tertiary structures.
    Wang CW; Chen KT; Lu CL
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W340-7. PubMed ID: 20507908
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SARSA: a web tool for structural alignment of RNA using a structural alphabet.
    Chang YF; Huang YL; Lu CL
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W19-24. PubMed ID: 18502774
    [TBL] [Abstract][Full Text] [Related]  

  • 3. iPARTS2: an improved tool for pairwise alignment of RNA tertiary structures, version 2.
    Yang CH; Shih CT; Chen KT; Lee PH; Tsai PH; Lin JC; Yen CY; Lin TY; Lu CL
    Nucleic Acids Res; 2016 Jul; 44(W1):W328-32. PubMed ID: 27185896
    [TBL] [Abstract][Full Text] [Related]  

  • 4. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
    Ferrè F; Ponty Y; Lorenz WA; Clote P
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W659-68. PubMed ID: 17567620
    [TBL] [Abstract][Full Text] [Related]  

  • 5. R3D-BLAST2: an improved search tool for similar RNA 3D substructures.
    Yen CY; Lin JC; Chen KT; Lu CL
    BMC Bioinformatics; 2017 Dec; 18(Suppl 16):574. PubMed ID: 29297283
    [TBL] [Abstract][Full Text] [Related]  

  • 6. R3D-BLAST: a search tool for similar RNA 3D substructures.
    Liu YC; Yang CH; Chen KT; Wang JR; Cheng ML; Chung JC; Chiu HT; Lu CL
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W45-9. PubMed ID: 21624889
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Web-Beagle: a web server for the alignment of RNA secondary structures.
    Mattei E; Pietrosanto M; Ferrè F; Helmer-Citterich M
    Nucleic Acids Res; 2015 Jul; 43(W1):W493-7. PubMed ID: 25977293
    [TBL] [Abstract][Full Text] [Related]  

  • 8. FASTR3D: a fast and accurate search tool for similar RNA 3D structures.
    Lai CE; Tsai MY; Liu YC; Wang CW; Chen KT; Lu CL
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W287-95. PubMed ID: 19435878
    [TBL] [Abstract][Full Text] [Related]  

  • 9. WebSTAR3D: a web server for RNA 3D structural alignment.
    Holzhauser E; Ge P; Zhang S
    Bioinformatics; 2016 Dec; 32(23):3673-3675. PubMed ID: 27497443
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MultiSETTER: web server for multiple RNA structure comparison.
    Čech P; Hoksza D; Svozil D
    BMC Bioinformatics; 2015 Aug; 16():253. PubMed ID: 26264783
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The ARTS web server for aligning RNA tertiary structures.
    Dror O; Nussinov R; Wolfson HJ
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W412-5. PubMed ID: 16845038
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNAhugs web server for customized 3D RNA structure alignment.
    Zurkowski M; Swiercz M; Wozny F; Antczak M; Szachniuk M
    Nucleic Acids Res; 2024 Jul; 52(W1):W348-W353. PubMed ID: 38587206
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
    Havgaard JH; Lyngsø RB; Gorodkin J
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments.
    Di Tommaso P; Bussotti G; Kemena C; Capriotti E; Chatzou M; Prieto P; Notredame C
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W356-60. PubMed ID: 24972831
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.
    Li Y; Shi X; Liang Y; Xie J; Zhang Y; Ma Q
    BMC Bioinformatics; 2017 Jan; 18(1):51. PubMed ID: 28109252
    [TBL] [Abstract][Full Text] [Related]  

  • 16. R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
    Rahrig RR; Leontis NB; Zirbel CL
    Bioinformatics; 2010 Nov; 26(21):2689-97. PubMed ID: 20929913
    [TBL] [Abstract][Full Text] [Related]  

  • 17. R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structures.
    Rahrig RR; Petrov AI; Leontis NB; Zirbel CL
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W15-21. PubMed ID: 23716643
    [TBL] [Abstract][Full Text] [Related]  

  • 18. LCS-TA to identify similar fragments in RNA 3D structures.
    Wiedemann J; Zok T; Milostan M; Szachniuk M
    BMC Bioinformatics; 2017 Oct; 18(1):456. PubMed ID: 29058576
    [TBL] [Abstract][Full Text] [Related]  

  • 19. WebFR3D--a server for finding, aligning and analyzing recurrent RNA 3D motifs.
    Petrov AI; Zirbel CL; Leontis NB
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W50-5. PubMed ID: 21515634
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Automatic classification of protein structures relying on similarities between alignments.
    Santini G; Soldano H; Pothier J
    BMC Bioinformatics; 2012 Sep; 13():233. PubMed ID: 22974051
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.