BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

110 related articles for article (PubMed ID: 20513159)

  • 21. Characterization of nucleobase-amino acid stacking interactions utilized by a DNA repair enzyme.
    Rutledge LR; Campbell-Verduyn LS; Hunter KC; Wetmore SD
    J Phys Chem B; 2006 Oct; 110(39):19652-63. PubMed ID: 17004834
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Structures of nucleobases trapped within Au triangles and its effects on hydrogen bonding in base pairs of DNA.
    Mohan PJ; Datta A; Mallajosyula SS; Pati SK
    J Phys Chem B; 2006 Sep; 110(37):18661-4. PubMed ID: 16970496
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Experimental demonstration of T:(G:G:G:G):T hexad and T:A:A:T tetrad alignments within a DNA quadruplex stem.
    Webba da Silva M
    Biochemistry; 2005 Mar; 44(10):3754-64. PubMed ID: 15751952
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Influence of base stacking and hydrogen bonding on the fluorescence of 2-aminopurine and pyrrolocytosine in nucleic acids.
    Hardman SJ; Thompson KC
    Biochemistry; 2006 Aug; 45(30):9145-55. PubMed ID: 16866360
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Stability of nucleic acid base pairs in organic solvents: molecular dynamics, molecular dynamics/quenching, and correlated ab initio study.
    Zendlová L; Hobza P; Kabelác M
    J Phys Chem B; 2007 Mar; 111(10):2591-609. PubMed ID: 17302446
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Solution structure of a DNA decamer containing the antiviral drug ganciclovir: combined use of NMR, restrained molecular dynamics, and full relaxation matrix refinement.
    Foti M; Marshalko S; Schurter E; Kumar S; Beardsley GP; Schweitzer BI
    Biochemistry; 1997 May; 36(18):5336-45. PubMed ID: 9154915
    [TBL] [Abstract][Full Text] [Related]  

  • 27. An A-type double helix of DNA having B-type puckering of the deoxyribose rings.
    Trantírek L; Stefl R; Vorlícková M; Koca J; Sklenár V; Kypr J
    J Mol Biol; 2000 Apr; 297(4):907-22. PubMed ID: 10736226
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Exceptional thermodynamic stability of DNA duplexes modified by nonpolar base analogues is due to increased stacking interactions and favorable solvation: Correlated ab initio calculations and molecular dynamics simulations.
    Reha D; Hocek M; Hobza P
    Chemistry; 2006 Apr; 12(13):3587-95. PubMed ID: 16502452
    [TBL] [Abstract][Full Text] [Related]  

  • 29. A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet.
    Ban C; Ramakrishnan B; Sundaralingam M
    J Mol Biol; 1994 Feb; 236(1):275-85. PubMed ID: 7508984
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Double-helical --> ladder structural transition in the B-DNA is induced by a loss of dispersion energy.
    Cerný J; Kabelác M; Hobza P
    J Am Chem Soc; 2008 Nov; 130(47):16055-9. PubMed ID: 18975944
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A breathing wormlike chain model on DNA denaturation and bubble: effects of stacking interactions.
    Kim JY; Jeon JH; Sung W
    J Chem Phys; 2008 Feb; 128(5):055101. PubMed ID: 18266461
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Hydration and stability of nucleic acid bases and base pairs.
    Kabelác M; Hobza P
    Phys Chem Chem Phys; 2007 Feb; 9(8):903-17. PubMed ID: 17301881
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Base sequence and higher-order structure induce the complex excited-state dynamics in DNA.
    Schwalb NK; Temps F
    Science; 2008 Oct; 322(5899):243-5. PubMed ID: 18845751
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Light-induced formation of G-quadruplex DNA secondary structures.
    Mayer G; Kröck L; Mikat V; Engeser M; Heckel A
    Chembiochem; 2005 Nov; 6(11):1966-70. PubMed ID: 16178038
    [No Abstract]   [Full Text] [Related]  

  • 35. Nucleobases as supramolecular motifs.
    Sivakova S; Rowan SJ
    Chem Soc Rev; 2005 Jan; 34(1):9-21. PubMed ID: 15643486
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Evaluating the contributions of desolvation and base-stacking during translesion DNA synthesis.
    Zhang X; Lee I; Berdis AJ
    Org Biomol Chem; 2004 Jun; 2(12):1703-11. PubMed ID: 15188037
    [TBL] [Abstract][Full Text] [Related]  

  • 37. An intercalated and thermally stable FAPY adduct of aflatoxin B1 in a DNA duplex: structural refinement from 1H NMR.
    Mao H; Deng Z; Wang F; Harris TM; Stone MP
    Biochemistry; 1998 Mar; 37(13):4374-87. PubMed ID: 9521757
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Gas-phase DNA oligonucleotide structures. A QM/MM and atoms in molecules study.
    Robertazzi A; Platts JA
    J Phys Chem A; 2006 Mar; 110(11):3992-4000. PubMed ID: 16539422
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Conformational determinants of tandem GU mismatches in RNA: insights from molecular dynamics simulations and quantum mechanical calculations.
    Pan Y; Priyakumar UD; MacKerell AD
    Biochemistry; 2005 Feb; 44(5):1433-43. PubMed ID: 15683228
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Ab initio based surface-hopping dynamics study on ultrafast internal conversion in cyclopropanone.
    Cui G; Fang W
    J Phys Chem A; 2011 Mar; 115(9):1547-55. PubMed ID: 21322652
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.