191 related articles for article (PubMed ID: 20525254)
1. Development of a novel splice array platform and its application in the identification of alternative splice variants in lung cancer.
Pio R; Blanco D; Pajares MJ; Aibar E; Durany O; Ezponda T; Agorreta J; Gomez-Roman J; Anton MA; Rubio A; Lozano MD; López-Picazo JM; Subirada F; Maes T; Montuenga LM
BMC Genomics; 2010 Jun; 11():352. PubMed ID: 20525254
[TBL] [Abstract][Full Text] [Related]
2. Exon array analysis using re-defined probe sets results in reliable identification of alternatively spliced genes in non-small cell lung cancer.
Langer W; Sohler F; Leder G; Beckmann G; Seidel H; Gröne J; Hummel M; Sommer A
BMC Genomics; 2010 Nov; 11():676. PubMed ID: 21118496
[TBL] [Abstract][Full Text] [Related]
3. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
Fan W; Khalid N; Hallahan AR; Olson JM; Zhao LP
Theor Biol Med Model; 2006 Apr; 3():19. PubMed ID: 16603076
[TBL] [Abstract][Full Text] [Related]
4. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
Ha KCh; Coulombe-Huntington J; Majewski J
BMC Genomics; 2009 Nov; 10():519. PubMed ID: 19909511
[TBL] [Abstract][Full Text] [Related]
5. Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing.
Castle J; Garrett-Engele P; Armour CD; Duenwald SJ; Loerch PM; Meyer MR; Schadt EE; Stoughton R; Parrish ML; Shoemaker DD; Johnson JM
Genome Biol; 2003; 4(10):R66. PubMed ID: 14519201
[TBL] [Abstract][Full Text] [Related]
6. Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.
Dong L; Jensen RV; De Rienzo A; Gordon GJ; Xu Y; Sugarbaker DJ; Bueno R
BMC Med Genet; 2009 Dec; 10():149. PubMed ID: 20043850
[TBL] [Abstract][Full Text] [Related]
7. Extent and diversity of human alternative splicing established by complementary database annotation and microarray analysis.
Bingham JL; Carrigan PE; Miller LJ; Srinivasan S
OMICS; 2008 Mar; 12(1):83-92. PubMed ID: 18266558
[TBL] [Abstract][Full Text] [Related]
8. Inferring global levels of alternative splicing isoforms using a generative model of microarray data.
Shai O; Morris QD; Blencowe BJ; Frey BJ
Bioinformatics; 2006 Mar; 22(5):606-13. PubMed ID: 16403798
[TBL] [Abstract][Full Text] [Related]
9. Predicting splice variant from DNA chip expression data.
Hu GK; Madore SJ; Moldover B; Jatkoe T; Balaban D; Thomas J; Wang Y
Genome Res; 2001 Jul; 11(7):1237-45. PubMed ID: 11435406
[TBL] [Abstract][Full Text] [Related]
10. A microarray configuration to quantify expression levels and relative abundance of splice variants.
Fehlbaum P; Guihal C; Bracco L; Cochet O
Nucleic Acids Res; 2005 Mar; 33(5):e47. PubMed ID: 15760843
[TBL] [Abstract][Full Text] [Related]
11. Detection of alternatively spliced transcripts in leukemia cell lines by minisequencing on microarrays.
Milani L; Fredriksson M; Syvänen AC
Clin Chem; 2006 Feb; 52(2):202-11. PubMed ID: 16384885
[TBL] [Abstract][Full Text] [Related]
12. Exon array analysis of head and neck cancers identifies a hypoxia related splice variant of LAMA3 associated with a poor prognosis.
Moller-Levet CS; Betts GN; Harris AL; Homer JJ; West CM; Miller CJ
PLoS Comput Biol; 2009 Nov; 5(11):e1000571. PubMed ID: 19936049
[TBL] [Abstract][Full Text] [Related]
13. Gene structure-based splice variant deconvolution using a microarray platform.
Wang H; Hubbell E; Hu JS; Mei G; Cline M; Lu G; Clark T; Siani-Rose MA; Ares M; Kulp DC; Haussler D
Bioinformatics; 2003; 19 Suppl 1():i315-22. PubMed ID: 12855476
[TBL] [Abstract][Full Text] [Related]
14. Alternative splicing in colon, bladder, and prostate cancer identified by exon array analysis.
Thorsen K; Sørensen KD; Brems-Eskildsen AS; Modin C; Gaustadnes M; Hein AM; Kruhøffer M; Laurberg S; Borre M; Wang K; Brunak S; Krainer AR; Tørring N; Dyrskjøt L; Andersen CL; Orntoft TF
Mol Cell Proteomics; 2008 Jul; 7(7):1214-24. PubMed ID: 18353764
[TBL] [Abstract][Full Text] [Related]
15. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
[TBL] [Abstract][Full Text] [Related]
16. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
Gardina PJ; Clark TA; Shimada B; Staples MK; Yang Q; Veitch J; Schweitzer A; Awad T; Sugnet C; Dee S; Davies C; Williams A; Turpaz Y
BMC Genomics; 2006 Dec; 7():325. PubMed ID: 17192196
[TBL] [Abstract][Full Text] [Related]
17. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
Shen S; Warzecha CC; Carstens RP; Xing Y
Bioinformatics; 2010 Jan; 26(2):268-9. PubMed ID: 19933160
[TBL] [Abstract][Full Text] [Related]
18. SpliceVista, a tool for splice variant identification and visualization in shotgun proteomics data.
Zhu Y; Hultin-Rosenberg L; Forshed J; Branca RM; Orre LM; Lehtiö J
Mol Cell Proteomics; 2014 Jun; 13(6):1552-62. PubMed ID: 24692640
[TBL] [Abstract][Full Text] [Related]
19. Identification of alternative splicing events regulated by the oncogenic factor SRSF1 in lung cancer.
de Miguel FJ; Sharma RD; Pajares MJ; Montuenga LM; Rubio A; Pio R
Cancer Res; 2014 Feb; 74(4):1105-15. PubMed ID: 24371231
[TBL] [Abstract][Full Text] [Related]
20. Identification of five mouse mu-opioid receptor (MOR) gene (Oprm1) splice variants containing a newly identified alternatively spliced exon.
Doyle GA; Sheng XR; Lin SS; Press DM; Grice DE; Buono RJ; Ferraro TN; Berrettini WH
Gene; 2007 Jun; 395(1-2):98-107. PubMed ID: 17398041
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
