These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 20529922)

  • 21. Protein folding simulations with genetic algorithms and a detailed molecular description.
    Pedersen JT; Moult J
    J Mol Biol; 1997 Jun; 269(2):240-59. PubMed ID: 9191068
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins.
    Roche R; Bhattacharya S; Bhattacharya D
    PLoS Comput Biol; 2021 Feb; 17(2):e1008753. PubMed ID: 33621244
    [TBL] [Abstract][Full Text] [Related]  

  • 23. De novo protein fold design through sequence-independent fragment assembly simulations.
    Pearce R; Huang X; Omenn GS; Zhang Y
    Proc Natl Acad Sci U S A; 2023 Jan; 120(4):e2208275120. PubMed ID: 36656852
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Role of local and nonlocal interactions in folding and misfolding of globular proteins.
    Kumar A; Baruah A; Biswas P
    J Chem Phys; 2017 Feb; 146(6):065102. PubMed ID: 28201889
    [TBL] [Abstract][Full Text] [Related]  

  • 25. AcconPred: Predicting Solvent Accessibility and Contact Number Simultaneously by a Multitask Learning Framework under the Conditional Neural Fields Model.
    Ma J; Wang S
    Biomed Res Int; 2015; 2015():678764. PubMed ID: 26339631
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Reducing the computational complexity of protein folding via fragment folding and assembly.
    Haspel N; Tsai CJ; Wolfson H; Nussinov R
    Protein Sci; 2003 Jun; 12(6):1177-87. PubMed ID: 12761388
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Protein structure prediction enhanced with evolutionary diversity: SPEED.
    DeBartolo J; Hocky G; Wilde M; Xu J; Freed KF; Sosnick TR
    Protein Sci; 2010 Mar; 19(3):520-34. PubMed ID: 20066664
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Beta-sheet folding of fragment (16-36) of bovine pancreatic trypsin inhibitor as predicted by Monte Carlo simulated annealing.
    Nakazawa T; Kawai H; Okamoto Y; Fukugita M
    Protein Eng; 1992 Sep; 5(6):495-503. PubMed ID: 1279665
    [TBL] [Abstract][Full Text] [Related]  

  • 29. All-atom ab initio folding of a diverse set of proteins.
    Yang JS; Chen WW; Skolnick J; Shakhnovich EI
    Structure; 2007 Jan; 15(1):53-63. PubMed ID: 17223532
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Identifying native-like protein structures using physics-based potentials.
    Dominy BN; Brooks CL
    J Comput Chem; 2002 Jan; 23(1):147-60. PubMed ID: 11913380
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A novel approach to fold recognition using sequence-derived properties from sets of structurally similar local fragments of proteins.
    Hvidsten TR; Kryshtafovych A; Komorowski J; Fidelis K
    Bioinformatics; 2003 Oct; 19 Suppl 2():ii81-91. PubMed ID: 14534176
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Using robotics to fold proteins and dock ligands.
    Brutlag D; Apaydin S; Guestrin C; Hsu D; Varma C; Singh A; Latombe JC
    Bioinformatics; 2002; 18 Suppl 2():S74. PubMed ID: 12385986
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Kinetics of protein folding. A lattice model study of the requirements for folding to the native state.
    Sali A; Shakhnovich E; Karplus M
    J Mol Biol; 1994 Feb; 235(5):1614-36. PubMed ID: 8107095
    [TBL] [Abstract][Full Text] [Related]  

  • 34. A novel exhaustive search algorithm for predicting the conformation of polypeptide segments in proteins.
    Deane CM; Blundell TL
    Proteins; 2000 Jul; 40(1):135-44. PubMed ID: 10813838
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Development of an ab initio protein structure prediction system ABLE.
    Ishida T; Nishimura T; Nozaki M; Inoue T; Terada T; Nakamura S; Shimizu K
    Genome Inform; 2003; 14():228-37. PubMed ID: 15706537
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Distinguishing native conformations of proteins from decoys with an effective free energy estimator based on the OPLS all-atom force field and the Surface Generalized Born solvent model.
    Felts AK; Gallicchio E; Wallqvist A; Levy RM
    Proteins; 2002 Aug; 48(2):404-22. PubMed ID: 12112706
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Benchmarking of TASSER in the ab initio limit.
    Borreguero JM; Skolnick J
    Proteins; 2007 Jul; 68(1):48-56. PubMed ID: 17444524
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Genetic algorithms for protein folding simulations.
    Unger R; Moult J
    J Mol Biol; 1993 May; 231(1):75-81. PubMed ID: 8496967
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A Novel Method Using Abstract Convex Underestimation in Ab-Initio Protein Structure Prediction for Guiding Search in Conformational Feature Space.
    Hao XH; Zhang GJ; Zhou XG; Yu XF
    IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(5):887-900. PubMed ID: 26552093
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Protein structure prediction based on fragment assembly and parameter optimization.
    Lee J; Kim SY; Lee J
    Biophys Chem; 2005 Apr; 115(2-3):209-14. PubMed ID: 15752606
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.