BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

227 related articles for article (PubMed ID: 20536206)

  • 1. Protonation states of the key active site residues and structural dynamics of the glmS riboswitch as revealed by molecular dynamics.
    Banás P; Walter NG; Sponer J; Otyepka M
    J Phys Chem B; 2010 Jul; 114(26):8701-12. PubMed ID: 20536206
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Deciphering the role of glucosamine-6-phosphate in the riboswitch action of glmS ribozyme.
    Xin Y; Hamelberg D
    RNA; 2010 Dec; 16(12):2455-63. PubMed ID: 20971809
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Chemical feasibility of the general acid/base mechanism of glmS ribozyme self-cleavage.
    Dubecký M; Walter NG; Šponer J; Otyepka M; Banáš P
    Biopolymers; 2015 Oct; 103(10):550-62. PubMed ID: 25858644
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structural basis of glmS ribozyme activation by glucosamine-6-phosphate.
    Klein DJ; Ferré-D'Amaré AR
    Science; 2006 Sep; 313(5794):1752-6. PubMed ID: 16990543
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Examination of the structural and functional versatility of glmS ribozymes by using in vitro selection.
    Link KH; Guo L; Breaker RR
    Nucleic Acids Res; 2006; 34(17):4968-75. PubMed ID: 16982640
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Trans-acting glmS catalytic riboswitch: locked and loaded.
    Tinsley RA; Furchak JR; Walter NG
    RNA; 2007 Apr; 13(4):468-77. PubMed ID: 17283212
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Role of the active site guanine in the glmS ribozyme self-cleavage mechanism: quantum mechanical/molecular mechanical free energy simulations.
    Zhang S; Ganguly A; Goyal P; Bingaman JL; Bevilacqua PC; Hammes-Schiffer S
    J Am Chem Soc; 2015 Jan; 137(2):784-98. PubMed ID: 25526516
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Requirement of helix P2.2 and nucleotide G1 for positioning the cleavage site and cofactor of the glmS ribozyme.
    Klein DJ; Wilkinson SR; Been MD; Ferré-D'Amaré AR
    J Mol Biol; 2007 Oct; 373(1):178-89. PubMed ID: 17804015
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme.
    Cochrane JC; Lipchock SV; Smith KD; Strobel SA
    Biochemistry; 2009 Apr; 48(15):3239-46. PubMed ID: 19228039
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Evidence for preorganization of the glmS ribozyme ligand binding pocket.
    Hampel KJ; Tinsley MM
    Biochemistry; 2006 Jun; 45(25):7861-71. PubMed ID: 16784238
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Core requirements for glmS ribozyme self-cleavage reveal a putative pseudoknot structure.
    Soukup GA
    Nucleic Acids Res; 2006; 34(3):968-75. PubMed ID: 16464827
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structural investigation of the GlmS ribozyme bound to Its catalytic cofactor.
    Cochrane JC; Lipchock SV; Strobel SA
    Chem Biol; 2007 Jan; 14(1):97-105. PubMed ID: 17196404
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An expanded collection and refined consensus model of glmS ribozymes.
    McCown PJ; Roth A; Breaker RR
    RNA; 2011 Apr; 17(4):728-36. PubMed ID: 21367971
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Rapid steps in the glmS ribozyme catalytic pathway: cation and ligand requirements.
    Brooks KM; Hampel KJ
    Biochemistry; 2011 Apr; 50(13):2424-33. PubMed ID: 21395279
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The glmS ribozyme: use of a small molecule coenzyme by a gene-regulatory RNA.
    Ferré-D'Amaré AR
    Q Rev Biophys; 2010 Nov; 43(4):423-47. PubMed ID: 20822574
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The GlcN6P cofactor plays multiple catalytic roles in the glmS ribozyme.
    Bingaman JL; Zhang S; Stevens DR; Yennawar NH; Hammes-Schiffer S; Bevilacqua PC
    Nat Chem Biol; 2017 Apr; 13(4):439-445. PubMed ID: 28192411
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Use of a coenzyme by the glmS ribozyme-riboswitch suggests primordial expansion of RNA chemistry by small molecules.
    Ferré-D'Amaré AR
    Philos Trans R Soc Lond B Biol Sci; 2011 Oct; 366(1580):2942-8. PubMed ID: 21930586
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Engineering a Glucosamine-6-phosphate Responsive glmS Ribozyme Switch Enables Dynamic Control of Metabolic Flux in Bacillus subtilis for Overproduction of N-Acetylglucosamine.
    Niu T; Liu Y; Li J; Koffas M; Du G; Alper HS; Liu L
    ACS Synth Biol; 2018 Oct; 7(10):2423-2435. PubMed ID: 30138558
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of metal ion dependence in glmS ribozyme self-cleavage and coenzyme binding.
    Klawuhn K; Jansen JA; Souchek J; Soukup GA; Soukup JK
    Chembiochem; 2010 Dec; 11(18):2567-71. PubMed ID: 21108273
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The glmS ribozyme tunes the catalytically critical pK(a) of its coenzyme glucosamine-6-phosphate.
    Gong B; Klein DJ; Ferré-D'Amaré AR; Carey PR
    J Am Chem Soc; 2011 Sep; 133(36):14188-91. PubMed ID: 21848325
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.