These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

159 related articles for article (PubMed ID: 20540577)

  • 1. When is chemical similarity significant? The statistical distribution of chemical similarity scores and its extreme values.
    Baldi P; Nasr R
    J Chem Inf Model; 2010 Jul; 50(7):1205-22. PubMed ID: 20540577
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BLASTing small molecules--statistics and extreme statistics of chemical similarity scores.
    Baldi P; Benz RW
    Bioinformatics; 2008 Jul; 24(13):i357-65. PubMed ID: 18586735
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ccbmlib - a Python package for modeling Tanimoto similarity value distributions.
    Vogt M; Bajorath J
    F1000Res; 2020; 9():. PubMed ID: 32161645
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Introduction of the conditional correlated Bernoulli model of similarity value distributions and its application to the prospective prediction of fingerprint search performance.
    Vogt M; Bajorath J
    J Chem Inf Model; 2011 Oct; 51(10):2496-506. PubMed ID: 21892818
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bounds and algorithms for fast exact searches of chemical fingerprints in linear and sublinear time.
    Swamidass SJ; Baldi P
    J Chem Inf Model; 2007; 47(2):302-17. PubMed ID: 17326616
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Modeling Tanimoto Similarity Value Distributions and Predicting Search Results.
    Vogt M; Bajorath J
    Mol Inform; 2017 Jul; 36(7):. PubMed ID: 28032955
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Bit silencing in fingerprints enables the derivation of compound class-directed similarity metrics.
    Wang Y; Bajorath J
    J Chem Inf Model; 2008 Sep; 48(9):1754-9. PubMed ID: 18698839
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Euclidean chemical spaces from molecular fingerprints: Hamming distance and Hempel's ravens.
    Martin E; Cao E
    J Comput Aided Mol Des; 2015 May; 29(5):387-95. PubMed ID: 25475496
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mathematical correction for fingerprint similarity measures to improve chemical retrieval.
    Swamidass SJ; Baldi P
    J Chem Inf Model; 2007; 47(3):952-64. PubMed ID: 17444629
    [TBL] [Abstract][Full Text] [Related]  

  • 10. "Bayes affinity fingerprints" improve retrieval rates in virtual screening and define orthogonal bioactivity space: when are multitarget drugs a feasible concept?
    Bender A; Jenkins JL; Glick M; Deng Z; Nettles JH; Davies JW
    J Chem Inf Model; 2006; 46(6):2445-56. PubMed ID: 17125186
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Large scale study of multiple-molecule queries.
    Nasr RJ; Swamidass SJ; Baldi PF
    J Cheminform; 2009 Jun; 1(1):7. PubMed ID: 20298525
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparing a Query Compound with Drug Target Classes Using 3D-Chemical Similarity.
    Lee SH; Ahn S; Kim MH
    Int J Mol Sci; 2020 Jun; 21(12):. PubMed ID: 32545691
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Score distributions for simultaneous matching to multiple motifs.
    Bailey TL; Gribskov M
    J Comput Biol; 1997; 4(1):45-59. PubMed ID: 9109037
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Design and evaluation of a molecular fingerprint involving the transformation of property descriptor values into a binary classification scheme.
    Xue L; Godden JW; Stahura FL; Bajorath J
    J Chem Inf Comput Sci; 2003; 43(4):1151-7. PubMed ID: 12870906
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Extended similarity indices: the benefits of comparing more than two objects simultaneously. Part 2: speed, consistency, diversity selection.
    Miranda-Quintana RA; Rácz A; Bajusz D; Héberger K
    J Cheminform; 2021 Apr; 13(1):33. PubMed ID: 33892799
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Life beyond the Tanimoto coefficient: similarity measures for interaction fingerprints.
    Rácz A; Bajusz D; Héberger K
    J Cheminform; 2018 Oct; 10(1):48. PubMed ID: 30288626
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Similarity searching of chemical databases using atom environment descriptors (MOLPRINT 2D): evaluation of performance.
    Bender A; Mussa HY; Glen RC; Reiling S
    J Chem Inf Comput Sci; 2004; 44(5):1708-18. PubMed ID: 15446830
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Design of chemical space networks using a Tanimoto similarity variant based upon maximum common substructures.
    Zhang B; Vogt M; Maggiora GM; Bajorath J
    J Comput Aided Mol Des; 2015 Oct; 29(10):937-50. PubMed ID: 26419860
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Introduction of a generally applicable method to estimate retrieval of active molecules for similarity searching using fingerprints.
    Vogt M; Bajorath J
    ChemMedChem; 2007 Sep; 2(9):1311-20. PubMed ID: 17562536
    [TBL] [Abstract][Full Text] [Related]  

  • 20. KNIME-based Analysis of Off-Target Effect of Drugs Related to The Molecular 2D Fingerprint.
    Karimah N; Schaftenaar G
    J Pharm Pharm Sci; 2021; 24():256-266. PubMed ID: 34048670
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.