237 related articles for article (PubMed ID: 20552684)
1. Structural comparison and classification of alpha-helical transmembrane domains based on helix interaction patterns.
Fuchs A; Frishman D
Proteins; 2010 Sep; 78(12):2587-99. PubMed ID: 20552684
[TBL] [Abstract][Full Text] [Related]
2. Current status of membrane protein structure classification.
Neumann S; Fuchs A; Mulkidjanian A; Frishman D
Proteins; 2010 May; 78(7):1760-73. PubMed ID: 20186977
[TBL] [Abstract][Full Text] [Related]
3. Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.
Fuchs A; Kirschner A; Frishman D
Proteins; 2009 Mar; 74(4):857-71. PubMed ID: 18704938
[TBL] [Abstract][Full Text] [Related]
4. Structural determinants of transmembrane helical proteins.
Harrington SE; Ben-Tal N
Structure; 2009 Aug; 17(8):1092-103. PubMed ID: 19679087
[TBL] [Abstract][Full Text] [Related]
5. Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins.
Adamian L; Liang J
J Mol Biol; 2001 Aug; 311(4):891-907. PubMed ID: 11518538
[TBL] [Abstract][Full Text] [Related]
6. Assembly of transmembrane helices of simple polytopic membrane proteins from sequence conservation patterns.
Park Y; Helms V
Proteins; 2006 Sep; 64(4):895-905. PubMed ID: 16807902
[TBL] [Abstract][Full Text] [Related]
7. Classification of α-helical membrane proteins using predicted helix architectures.
Neumann S; Fuchs A; Hummel B; Frishman D
PLoS One; 2013; 8(10):e77491. PubMed ID: 24204844
[TBL] [Abstract][Full Text] [Related]
8. Distinct protein interfaces in transmembrane domains suggest an in vivo folding model.
Stevens TJ; Mizuguchi K; Arkin IT
Protein Sci; 2004 Nov; 13(11):3028-37. PubMed ID: 15498942
[TBL] [Abstract][Full Text] [Related]
9. Helix packing moments reveal diversity and conservation in membrane protein structure.
Liu W; Eilers M; Patel AB; Smith SO
J Mol Biol; 2004 Mar; 337(3):713-29. PubMed ID: 15019789
[TBL] [Abstract][Full Text] [Related]
10. Structural classification of HTH DNA-binding domains and protein-DNA interaction modes.
Wintjens R; Rooman M
J Mol Biol; 1996 Sep; 262(2):294-313. PubMed ID: 8831795
[TBL] [Abstract][Full Text] [Related]
11. Peptides as transmembrane segments: decrypting the determinants for helix-helix interactions in membrane proteins.
Rath A; Johnson RM; Deber CM
Biopolymers; 2007; 88(2):217-32. PubMed ID: 17206630
[TBL] [Abstract][Full Text] [Related]
12. Defining the fold space of membrane proteins: the CAMPS database.
Martin-Galiano AJ; Frishman D
Proteins; 2006 Sep; 64(4):906-22. PubMed ID: 16802318
[TBL] [Abstract][Full Text] [Related]
13. Dissecting membrane protein architecture: An annotation of structural complexity.
Arce J; Sturgis JN; Duneau JP
Biopolymers; 2009 Oct; 91(10):815-29. PubMed ID: 19437433
[TBL] [Abstract][Full Text] [Related]
14. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
Yang AS; Honig B
J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
[TBL] [Abstract][Full Text] [Related]
15. Strength of Calpha-H...O=C hydrogen bonds in transmembrane proteins.
Park H; Yoon J; Seok C
J Phys Chem B; 2008 Jan; 112(3):1041-8. PubMed ID: 18154287
[TBL] [Abstract][Full Text] [Related]
16. A hidden Markov model with molecular mechanics energy-scoring function for transmembrane helix prediction.
Zheng WJ; Spassov VZ; Yan L; Flook PK; Szalma S
Comput Biol Chem; 2004 Oct; 28(4):265-74. PubMed ID: 15548453
[TBL] [Abstract][Full Text] [Related]
17. Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.
Senes A; Gerstein M; Engelman DM
J Mol Biol; 2000 Feb; 296(3):921-36. PubMed ID: 10677292
[TBL] [Abstract][Full Text] [Related]
18. How strongly do sequence conservation patterns and empirical scales correlate with exposure patterns of transmembrane helices of membrane proteins?
Park Y; Helms V
Biopolymers; 2006 Nov; 83(4):389-99. PubMed ID: 16838301
[TBL] [Abstract][Full Text] [Related]
19. An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance.
Yang AS; Honig B
J Mol Biol; 2000 Aug; 301(3):665-78. PubMed ID: 10966776
[TBL] [Abstract][Full Text] [Related]
20. Characterization of peptides corresponding to the seven transmembrane domains of human adenosine A2a receptor.
Lazarova T; Brewin KA; Stoeber K; Robinson CR
Biochemistry; 2004 Oct; 43(40):12945-54. PubMed ID: 15461468
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
