168 related articles for article (PubMed ID: 20565056)
1. Binding characteristics of small molecules that mimic nucleocapsid protein-induced maturation of stem-loop 1 of HIV-1 RNA.
Chung J; Ulyanov NB; Guilbert C; Mujeeb A; James TL
Biochemistry; 2010 Aug; 49(30):6341-51. PubMed ID: 20565056
[TBL] [Abstract][Full Text] [Related]
2. A small molecule, Lys-Ala-7-amido-4-methylcoumarin, facilitates RNA dimer maturation of a stem-loop 1 transcript in vitro: structure-activity relationship of the activator.
Chung J; Mujeeb A; Jiang Y; Guilbert C; Pendke M; Wu Y; James TL
Biochemistry; 2008 Aug; 47(31):8148-56. PubMed ID: 18616287
[TBL] [Abstract][Full Text] [Related]
3. Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding.
Mujeeb A; Ulyanov NB; Georgantis S; Smirnov I; Chung J; Parslow TG; James TL
Nucleic Acids Res; 2007; 35(6):2026-34. PubMed ID: 17341460
[TBL] [Abstract][Full Text] [Related]
4. SL1 revisited: functional analysis of the structure and conformation of HIV-1 genome RNA.
Sakuragi S; Yokoyama M; Shioda T; Sato H; Sakuragi JI
Retrovirology; 2016 Nov; 13(1):79. PubMed ID: 27835956
[TBL] [Abstract][Full Text] [Related]
5. NMR structure of the full-length linear dimer of stem-loop-1 RNA in the HIV-1 dimer initiation site.
Ulyanov NB; Mujeeb A; Du Z; Tonelli M; Parslow TG; James TL
J Biol Chem; 2006 Jun; 281(23):16168-77. PubMed ID: 16603544
[TBL] [Abstract][Full Text] [Related]
6. Stem of SL1 RNA in HIV-1: structure and nucleocapsid protein binding for a 1 x 3 internal loop.
Yuan Y; Kerwood DJ; Paoletti AC; Shubsda MF; Borer PN
Biochemistry; 2003 May; 42(18):5259-69. PubMed ID: 12731867
[TBL] [Abstract][Full Text] [Related]
7. Structure of the intact stem and bulge of HIV-1 Psi-RNA stem-loop SL1.
Lawrence DC; Stover CC; Noznitsky J; Wu Z; Summers MF
J Mol Biol; 2003 Feb; 326(2):529-42. PubMed ID: 12559920
[TBL] [Abstract][Full Text] [Related]
8. Mechanism of nucleocapsid protein catalyzed structural isomerization of the dimerization initiation site of HIV-1.
Rist MJ; Marino JP
Biochemistry; 2002 Dec; 41(50):14762-70. PubMed ID: 12475224
[TBL] [Abstract][Full Text] [Related]
9. Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.
Clever JL; Wong ML; Parslow TG
J Virol; 1996 Sep; 70(9):5902-8. PubMed ID: 8709210
[TBL] [Abstract][Full Text] [Related]
10. Noncovalent probes for the investigation of structure and dynamics of protein-nucleic acid assemblies: the case of NC-mediated dimerization of genomic RNA in HIV-1.
Turner KB; Kohlway AS; Hagan NA; Fabris D
Biopolymers; 2009 Apr; 91(4):283-96. PubMed ID: 18946871
[TBL] [Abstract][Full Text] [Related]
11. Mutant human immunodeficiency virus type 1 genomes with defects in RNA dimerization or encapsidation.
Clever JL; Parslow TG
J Virol; 1997 May; 71(5):3407-14. PubMed ID: 9094610
[TBL] [Abstract][Full Text] [Related]
12. Resolving fast and slow motions in the internal loop containing stem-loop 1 of HIV-1 that are modulated by Mg2+ binding: role in the kissing-duplex structural transition.
Sun X; Zhang Q; Al-Hashimi HM
Nucleic Acids Res; 2007; 35(5):1698-713. PubMed ID: 17311812
[TBL] [Abstract][Full Text] [Related]
13. Elements located upstream and downstream of the major splice donor site influence the ability of HIV-2 leader RNA to dimerize in vitro.
Lanchy JM; Rentz CA; Ivanovitch JD; Lodmell JS
Biochemistry; 2003 Mar; 42(9):2634-42. PubMed ID: 12614158
[TBL] [Abstract][Full Text] [Related]
14. NMR analysis of intra- and inter-molecular stems in the dimerization initiation site of the HIV-1 genome.
Takahashi K; Baba S; Hayashi Y; Koyanagi Y; Yamamoto N; Takaku H; Kawai G
J Biochem; 2000 Apr; 127(4):681-6. PubMed ID: 10739962
[TBL] [Abstract][Full Text] [Related]
15. A new NMR solution structure of the SL1 HIV-1Lai loop-loop dimer.
Kieken F; Paquet F; Brulé F; Paoletti J; Lancelot G
Nucleic Acids Res; 2006; 34(1):343-52. PubMed ID: 16410614
[TBL] [Abstract][Full Text] [Related]
16. HIV-1 viral RNA is selected in the form of monomers that dimerize in a three-step protease-dependent process; the DIS of stem-loop 1 initiates viral RNA dimerization.
Song R; Kafaie J; Yang L; Laughrea M
J Mol Biol; 2007 Aug; 371(4):1084-98. PubMed ID: 17599354
[TBL] [Abstract][Full Text] [Related]
17. NMR structure of the mature dimer initiation complex of HIV-1 genomic RNA.
Mujeeb A; Parslow TG; Zarrinpar A; Das C; James TL
FEBS Lett; 1999 Sep; 458(3):387-92. PubMed ID: 10570946
[TBL] [Abstract][Full Text] [Related]
18. The in vitro loose dimer structure and rearrangements of the HIV-2 leader RNA.
Purzycka KJ; Pachulska-Wieczorek K; Adamiak RW
Nucleic Acids Res; 2011 Sep; 39(16):7234-48. PubMed ID: 21622659
[TBL] [Abstract][Full Text] [Related]
19. A proton-coupled dynamic conformational switch in the HIV-1 dimerization initiation site kissing complex.
Mihailescu MR; Marino JP
Proc Natl Acad Sci U S A; 2004 Feb; 101(5):1189-94. PubMed ID: 14734802
[TBL] [Abstract][Full Text] [Related]
20. NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
Amarasinghe GK; De Guzman RN; Turner RB; Chancellor KJ; Wu ZR; Summers MF
J Mol Biol; 2000 Aug; 301(2):491-511. PubMed ID: 10926523
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
