These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

147 related articles for article (PubMed ID: 20568853)

  • 1. Isochronal sampling in non-Boltzmann Monte Carlo methods.
    Abreu CR
    J Chem Phys; 2009 Oct; 131(15):154113. PubMed ID: 20568853
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A general framework for non-Boltzmann Monte Carlo sampling.
    Abreu CR; Escobedo FA
    J Chem Phys; 2006 Feb; 124(5):054116. PubMed ID: 16468860
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Density guided importance sampling: application to a reduced model of protein folding.
    Thomas GL; Sessions RB; Parker MJ
    Bioinformatics; 2005 Jun; 21(12):2839-43. PubMed ID: 15802285
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimization of expanded ensemble methods.
    Escobedo FA; Martinez-Veracoechea FJ
    J Chem Phys; 2008 Oct; 129(15):154107. PubMed ID: 19045176
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Application of the multiensemble sampling to the equilibrium folding of proteins.
    Son HS; Kim SY; Lee J; Han KK
    Bioinformatics; 2006 Aug; 22(15):1832-7. PubMed ID: 16766555
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Biopolymer structure simulation and optimization via fragment regrowth Monte Carlo.
    Zhang J; Kou SC; Liu JS
    J Chem Phys; 2007 Jun; 126(22):225101. PubMed ID: 17581081
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models.
    Liu Z; Chan HS
    J Chem Phys; 2008 Apr; 128(14):145104. PubMed ID: 18412482
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Conformational transition free energy profiles of an adsorbed, lattice model protein by multicanonical Monte Carlo simulation.
    Castells V; Van Tassel PR
    J Chem Phys; 2005 Feb; 122(8):84707. PubMed ID: 15836077
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Surface phase transitions in one-dimensional channels arranged in a triangular cross-sectional structure: theory and Monte Carlo simulations.
    Pasinetti PM; Romá F; Riccardo JL; Ramirez-Pastor AJ
    J Chem Phys; 2006 Dec; 125(21):214705. PubMed ID: 17166038
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cool walking: a new Markov chain Monte Carlo sampling method.
    Brown S; Head-Gordon T
    J Comput Chem; 2003 Jan; 24(1):68-76. PubMed ID: 12483676
    [TBL] [Abstract][Full Text] [Related]  

  • 11. New Monte Carlo algorithms for protein folding.
    Hansmann UH; Okamoto Y
    Curr Opin Struct Biol; 1999 Apr; 9(2):177-83. PubMed ID: 10322208
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Accelerating flat-histogram methods for potential of mean force calculations.
    Janosi L; Doxastakis M
    J Chem Phys; 2009 Aug; 131(5):054105. PubMed ID: 19673549
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Overcoming entropic barrier with coupled sampling at dual resolutions.
    Lwin TZ; Luo R
    J Chem Phys; 2005 Nov; 123(19):194904. PubMed ID: 16321110
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Generalized-ensemble algorithms: enhanced sampling techniques for Monte Carlo and molecular dynamics simulations.
    Okamoto Y
    J Mol Graph Model; 2004 May; 22(5):425-39. PubMed ID: 15099838
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Monte Carlo estimation of the number of possible protein folds: effects of sampling bias and folds distributions.
    Leonov H; Mitchell JS; Arkin IT
    Proteins; 2003 May; 51(3):352-9. PubMed ID: 12696047
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Testing a new Monte Carlo algorithm for protein folding.
    Bastolla U; Frauenkron H; Gerstner E; Grassberger P; Nadler W
    Proteins; 1998 Jul; 32(1):52-66. PubMed ID: 9672042
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Optimized expanded ensembles for simulations involving molecular insertions and deletions. I. Closed systems.
    Escobedo FA; Martínez-Veracoechea FJ
    J Chem Phys; 2007 Nov; 127(17):174103. PubMed ID: 17994803
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Folding simulations of small proteins.
    Kim SY; Lee J; Lee J
    Biophys Chem; 2005 Apr; 115(2-3):195-200. PubMed ID: 15752604
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Computational methods in coupled electron-ion Monte Carlo simulations.
    Pierleoni C; Ceperley DM
    Chemphyschem; 2005 Sep; 6(9):1872-8. PubMed ID: 16088971
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Accurate estimation of the density of states from Monte Carlo transition probability data.
    Fenwick MK
    J Chem Phys; 2006 Oct; 125(14):144905. PubMed ID: 17042648
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.