BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

298 related articles for article (PubMed ID: 20571679)

  • 1. The effects of side chain hydrophobicity on the denaturation of simple beta-hairpins.
    Wei H; Shao Q; Gao YQ
    Phys Chem Chem Phys; 2010 Aug; 12(32):9292-9. PubMed ID: 20571679
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B; Nussinov R
    J Mol Biol; 2000 Mar; 296(4):1091-104. PubMed ID: 10686106
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding.
    Griffiths-Jones SR; Maynard AJ; Searle MS
    J Mol Biol; 1999 Oct; 292(5):1051-69. PubMed ID: 10512702
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mutation of charged residues to neutral ones accelerates urea denaturation of HP-35.
    Wei H; Yang L; Gao YQ
    J Phys Chem B; 2010 Sep; 114(36):11820-6. PubMed ID: 20726545
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Effects of a mutation on the folding mechanism of a beta-hairpin.
    Juraszek J; Bolhuis PG
    J Phys Chem B; 2009 Dec; 113(50):16184-96. PubMed ID: 19924848
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Effects of turn stability and side-chain hydrophobicity on the folding of β-structures.
    Shao Q; Wei H; Gao YQ
    J Mol Biol; 2010 Sep; 402(3):595-609. PubMed ID: 20804769
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Understanding the mechanism of beta-hairpin folding via phi-value analysis.
    Du D; Tucker MJ; Gai F
    Biochemistry; 2006 Feb; 45(8):2668-78. PubMed ID: 16489760
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair.
    Russell SJ; Blandl T; Skelton NJ; Cochran AG
    J Am Chem Soc; 2003 Jan; 125(2):388-95. PubMed ID: 12517150
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Effects of urea, tetramethyl urea, and trimethylamine N-oxide on aqueous solution structure and solvation of protein backbones: a molecular dynamics simulation study.
    Wei H; Fan Y; Gao YQ
    J Phys Chem B; 2010 Jan; 114(1):557-68. PubMed ID: 19928871
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Molecular insight into the counteraction of trehalose on urea-induced protein denaturation using molecular dynamics simulation.
    Zhang N; Liu FF; Dong XY; Sun Y
    J Phys Chem B; 2012 Jun; 116(24):7040-7. PubMed ID: 22607153
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterization of the denaturation of human alpha-lactalbumin in urea by molecular dynamics simulations.
    Smith LJ; Jones RM; van Gunsteren WF
    Proteins; 2005 Feb; 58(2):439-49. PubMed ID: 15558602
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cooperative folding mechanism of a beta-hairpin peptide studied by a multicanonical replica-exchange molecular dynamics simulation.
    Yoda T; Sugita Y; Okamoto Y
    Proteins; 2007 Mar; 66(4):846-59. PubMed ID: 17173285
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Interactions between hydrophobic and ionic solutes in aqueous guanidinium chloride and urea solutions: lessons for protein denaturation mechanism.
    O'Brien EP; Dima RI; Brooks B; Thirumalai D
    J Am Chem Soc; 2007 Jun; 129(23):7346-53. PubMed ID: 17503819
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Methanol strengthens hydrogen bonds and weakens hydrophobic interactions in proteins--a combined molecular dynamics and NMR study.
    Hwang S; Shao Q; Williams H; Hilty C; Gao YQ
    J Phys Chem B; 2011 May; 115(20):6653-60. PubMed ID: 21534580
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Cross-strand side-chain interactions versus turn conformation in beta-hairpins.
    de Alba E; Rico M; Jiménez MA
    Protein Sci; 1997 Dec; 6(12):2548-60. PubMed ID: 9416604
    [TBL] [Abstract][Full Text] [Related]  

  • 16. beta-hairpin folding and stability: molecular dynamics simulations of designed peptides in aqueous solution.
    Santiveri CM; Jiménez MA; Rico M; Van Gunsteren WF; Daura X
    J Pept Sci; 2004 Sep; 10(9):546-65. PubMed ID: 15473263
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dissecting contributions to the denaturant sensitivities of proteins.
    Dempsey CE; Piggot TJ; Mason PE
    Biochemistry; 2005 Jan; 44(2):775-81. PubMed ID: 15641805
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The slow folding reaction of barstar: the core tryptophan region attains tight packing before substantial secondary and tertiary structure formation and final compaction of the polypeptide chain.
    Sridevi K; Juneja J; Bhuyan AK; Krishnamoorthy G; Udgaonkar JB
    J Mol Biol; 2000 Sep; 302(2):479-95. PubMed ID: 10970747
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Folding of a tryptophan zipper peptide investigated on the basis of the nuclear Overhauser effect and thermal denaturation.
    Hwang S; Hilty C
    J Phys Chem B; 2011 Dec; 115(51):15355-61. PubMed ID: 22040105
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Simulations of macromolecules in protective and denaturing osmolytes: properties of mixed solvent systems and their effects on water and protein structure and dynamics.
    Beck DA; Bennion BJ; Alonso DO; Daggett V
    Methods Enzymol; 2007; 428():373-96. PubMed ID: 17875430
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.