BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 20601441)

  • 1. Modeling and analyzing complex biological networks incooperating experimental information on both network topology and stable states.
    Zou YM
    Bioinformatics; 2010 Aug; 26(16):2037-41. PubMed ID: 20601441
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A computational algebra approach to the reverse engineering of gene regulatory networks.
    Laubenbacher R; Stigler B
    J Theor Biol; 2004 Aug; 229(4):523-37. PubMed ID: 15246788
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Reduction of Boolean network models.
    Veliz-Cuba A
    J Theor Biol; 2011 Nov; 289():167-72. PubMed ID: 21907211
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Gene expression complex networks: synthesis, identification, and analysis.
    Lopes FM; Cesar RM; Costa Lda F
    J Comput Biol; 2011 Oct; 18(10):1353-67. PubMed ID: 21548810
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genetic network identification using convex programming.
    Julius A; Zavlanos M; Boyd S; Pappas GJ
    IET Syst Biol; 2009 May; 3(3):155-66. PubMed ID: 19449976
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Robustness and state-space structure of Boolean gene regulatory models.
    Willadsen K; Wiles J
    J Theor Biol; 2007 Dec; 249(4):749-65. PubMed ID: 17936309
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Generating Boolean networks with a prescribed attractor structure.
    Pal R; Ivanov I; Datta A; Bittner ML; Dougherty ER
    Bioinformatics; 2005 Nov; 21(21):4021-5. PubMed ID: 16150807
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Fixed point characterization of biological networks with complex graph topology.
    Radde N
    Bioinformatics; 2010 Nov; 26(22):2874-80. PubMed ID: 20826880
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Functional and evolutionary inference in gene networks: does topology matter?
    Siegal ML; Promislow DE; Bergman A
    Genetica; 2007 Jan; 129(1):83-103. PubMed ID: 16897451
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Inferring gene regulatory networks from time series data using the minimum description length principle.
    Zhao W; Serpedin E; Dougherty ER
    Bioinformatics; 2006 Sep; 22(17):2129-35. PubMed ID: 16845143
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Intrinsic properties of Boolean dynamics in complex networks.
    Kinoshita S; Iguchi K; Yamada HS
    J Theor Biol; 2009 Feb; 256(3):351-69. PubMed ID: 19014957
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Inferring Boolean networks with perturbation from sparse gene expression data: a general model applied to the interferon regulatory network.
    Yu L; Watterson S; Marshall S; Ghazal P
    Mol Biosyst; 2008 Oct; 4(10):1024-30. PubMed ID: 19082142
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identification of genetic network dynamics with unate structure.
    Porreca R; Cinquemani E; Lygeros J; Ferrari-Trecate G
    Bioinformatics; 2010 May; 26(9):1239-45. PubMed ID: 20305266
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The dynamics of conjunctive and disjunctive Boolean network models.
    Jarrah AS; Laubenbacher R; Veliz-Cuba A
    Bull Math Biol; 2010 Aug; 72(6):1425-47. PubMed ID: 20087672
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of pairwise gene interaction using threshold logic.
    Gowda T; Vrudhula S; Kim S
    Ann N Y Acad Sci; 2009 Mar; 1158():276-86. PubMed ID: 19348649
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Control of Boolean networks: hardness results and algorithms for tree structured networks.
    Akutsu T; Hayashida M; Ching WK; Ng MK
    J Theor Biol; 2007 Feb; 244(4):670-9. PubMed ID: 17069859
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The effect of scale-free topology on the robustness and evolvability of genetic regulatory networks.
    Greenbury SF; Johnston IG; Smith MA; Doye JP; Louis AA
    J Theor Biol; 2010 Nov; 267(1):48-61. PubMed ID: 20696172
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An analysis of the class of gene regulatory functions implied by a biochemical model.
    Grefenstette J; Kim S; Kauffman S
    Biosystems; 2006 May; 84(2):81-90. PubMed ID: 16384633
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Generating probabilistic Boolean networks from a prescribed transition probability matrix.
    Ching WK; Chen X; Tsing NK
    IET Syst Biol; 2009 Nov; 3(6):453-64. PubMed ID: 19947771
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Implicit methods for qualitative modeling of gene regulatory networks.
    Garg A; Mohanram K; De Micheli G; Xenarios I
    Methods Mol Biol; 2012; 786():397-443. PubMed ID: 21938638
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.