These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

148 related articles for article (PubMed ID: 20624781)

  • 1. A comparison of several algorithms for the single individual SNP haplotyping reconstruction problem.
    Geraci F
    Bioinformatics; 2010 Sep; 26(18):2217-25. PubMed ID: 20624781
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A fast and accurate algorithm for diploid individual haplotype reconstruction.
    Wu J; Liang B
    J Bioinform Comput Biol; 2013 Aug; 11(4):1350010. PubMed ID: 23859274
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques.
    Duitama J; McEwen GK; Huebsch T; Palczewski S; Schulz S; Verstrepen K; Suk EK; Hoehe MR
    Nucleic Acids Res; 2012 Mar; 40(5):2041-53. PubMed ID: 22102577
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SpeedHap: an accurate heuristic for the single individual SNP haplotyping problem with many gaps, high reading error rate and low coverage.
    Genovese LM; Geraci F; Pellegrini M
    IEEE/ACM Trans Comput Biol Bioinform; 2008; 5(4):492-502. PubMed ID: 18989037
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data.
    Yang WY; Hormozdiari F; Wang Z; He D; Pasaniuc B; Eskin E
    Bioinformatics; 2013 Sep; 29(18):2245-52. PubMed ID: 23825370
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Integrating dilution-based sequencing and population genotypes for single individual haplotyping.
    Matsumoto H; Kiryu H
    BMC Genomics; 2014 Aug; 15(1):733. PubMed ID: 25167975
    [TBL] [Abstract][Full Text] [Related]  

  • 7. RadixHap: a radix tree-based heuristic for solving the single individual haplotyping problem.
    Wang TC; Taheri J; Zomaya AY
    Int J Bioinform Res Appl; 2015; 11(1):10-29. PubMed ID: 25667383
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Efficient fast heuristic algorithms for minimum error correction haplotyping from SNP fragments.
    Anaraki MP; Sadeghi M
    Int J Comput Biol Drug Des; 2014; 7(4):358-68. PubMed ID: 25539847
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PEATH: single-individual haplotyping by a probabilistic evolutionary algorithm with toggling.
    Na JC; Lee JC; Rhee JK; Shin SY
    Bioinformatics; 2018 Jun; 34(11):1801-1807. PubMed ID: 29342247
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Joint haplotype assembly and genotype calling via sequential Monte Carlo algorithm.
    Ahn S; Vikalo H
    BMC Bioinformatics; 2015 Jul; 16():223. PubMed ID: 26178880
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Haplotyping a single triploid individual based on genetic algorithm.
    Wu J; Chen X; Li X
    Biomed Mater Eng; 2014; 24(6):3753-62. PubMed ID: 25227091
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Haplotype inferring via galled-tree networks is NP-complete.
    Gupta A; Karimi MM; Manuch J; Stacho L; Zhao X
    J Comput Biol; 2010 Oct; 17(10):1435-49. PubMed ID: 20937016
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A model of higher accuracy for the individual haplotyping problem based on weighted SNP fragments and genotype with errors.
    Xie M; Wang J; Chen J
    Bioinformatics; 2008 Jul; 24(13):i105-13. PubMed ID: 18586702
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Research on parameterized algorithms of the individual haplotyping problem.
    Xie M; Chen J; Wang J
    J Bioinform Comput Biol; 2007 Jun; 5(3):795-816. PubMed ID: 17688317
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MixSIH: a mixture model for single individual haplotyping.
    Matsumoto H; Kiryu H
    BMC Genomics; 2013; 14 Suppl 2(Suppl 2):S5. PubMed ID: 23445519
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ISHAPE: new rapid and accurate software for haplotyping.
    Delaneau O; Coulonges C; Boelle PY; Nelson G; Spadoni JL; Zagury JF
    BMC Bioinformatics; 2007 Jun; 8():205. PubMed ID: 17573965
    [TBL] [Abstract][Full Text] [Related]  

  • 17. How well do HapMap haplotypes identify common haplotypes of genes? A comparison with haplotypes of 334 genes resequenced in the environmental genome project.
    Taylor JA; Xu ZL; Kaplan NL; Morris RW
    Cancer Epidemiol Biomarkers Prev; 2006 Jan; 15(1):133-7. PubMed ID: 16434598
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A better block partition and ligation strategy for individual haplotyping.
    Zhao Y; Xu Y; Wang Z; Zhang H; Chen G
    Bioinformatics; 2008 Dec; 24(23):2720-5. PubMed ID: 18845583
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Probabilistic single-individual haplotyping.
    Kuleshov V
    Bioinformatics; 2014 Sep; 30(17):i379-85. PubMed ID: 25161223
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The linkage method: a novel approach for SNP detection and haplotype reconstruction from a single diploid individual using next-generation sequence data.
    Sasaki E; Sugino RP; Innan H
    Mol Biol Evol; 2013 Sep; 30(9):2187-96. PubMed ID: 23728796
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.