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7. RNA Ensembles from Solvent Accessibility Data: Application to the SAM-I Riboswitch Aptamer Domain. Xie J; Frank AT J Phys Chem B; 2021 Apr; 125(14):3486-3493. PubMed ID: 33818089 [TBL] [Abstract][Full Text] [Related]
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9. Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch. Di Palma F; Colizzi F; Bussi G RNA; 2013 Nov; 19(11):1517-24. PubMed ID: 24051105 [TBL] [Abstract][Full Text] [Related]
10. Modulation of quaternary structure and enhancement of ligand binding by the K-turn of tandem glycine riboswitches. Baird NJ; Ferré-D'Amaré AR RNA; 2013 Feb; 19(2):167-76. PubMed ID: 23249744 [TBL] [Abstract][Full Text] [Related]
11. Mutational analysis of the purine riboswitch aptamer domain. Gilbert SD; Love CE; Edwards AL; Batey RT Biochemistry; 2007 Nov; 46(46):13297-309. PubMed ID: 17960911 [TBL] [Abstract][Full Text] [Related]
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14. Molecular insights into the ligand-controlled organization of the SAM-I riboswitch. Heppell B; Blouin S; Dussault AM; Mulhbacher J; Ennifar E; Penedo JC; Lafontaine DA Nat Chem Biol; 2011 Jun; 7(6):384-92. PubMed ID: 21532599 [TBL] [Abstract][Full Text] [Related]
15. Structural basis for diversity in the SAM clan of riboswitches. Trausch JJ; Xu Z; Edwards AL; Reyes FE; Ross PE; Knight R; Batey RT Proc Natl Acad Sci U S A; 2014 May; 111(18):6624-9. PubMed ID: 24753586 [TBL] [Abstract][Full Text] [Related]
16. Basis for ligand discrimination between ON and OFF state riboswitch conformations: the case of the SAM-I riboswitch. Boyapati VK; Huang W; Spedale J; Aboul-Ela F RNA; 2012 Jun; 18(6):1230-43. PubMed ID: 22543867 [TBL] [Abstract][Full Text] [Related]
17. MD simulations of ligand-bound and ligand-free aptamer: molecular level insights into the binding and switching mechanism of the add A-riboswitch. Sharma M; Bulusu G; Mitra A RNA; 2009 Sep; 15(9):1673-92. PubMed ID: 19625387 [TBL] [Abstract][Full Text] [Related]
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20. Molecular dynamics simulation on the allosteric analysis of the c-di-GMP class I riboswitch induced by ligand binding. Li C; Zhao X; Xie P; Hu J; Bi H J Mol Recognit; 2019 Jan; 32(1):e2756. PubMed ID: 30033590 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]