These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

200 related articles for article (PubMed ID: 20652820)

  • 1. Protein subunit interfaces: A statistical analysis of hot spots in Sm proteins.
    Stojanović SD; Zarić BL; Zarić SD
    J Mol Model; 2010 Nov; 16(11):1743-51. PubMed ID: 20652820
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Non-covalent interactions across subunit interfaces in Sm proteins.
    Zarić BL; Jovanović VB; Stojanović SĐ
    J Theor Biol; 2011 Feb; 271(1):18-26. PubMed ID: 21095194
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy.
    Tuncbag N; Gursoy A; Keskin O
    Bioinformatics; 2009 Jun; 25(12):1513-20. PubMed ID: 19357097
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Protein-protein interactions; coupling of structurally conserved residues and of hot spots across interfaces. Implications for docking.
    Halperin I; Wolfson H; Nussinov R
    Structure; 2004 Jun; 12(6):1027-38. PubMed ID: 15274922
    [TBL] [Abstract][Full Text] [Related]  

  • 5. APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility.
    Xia JF; Zhao XM; Song J; Huang DS
    BMC Bioinformatics; 2010 Apr; 11():174. PubMed ID: 20377884
    [TBL] [Abstract][Full Text] [Related]  

  • 6. HotSprint: database of computational hot spots in protein interfaces.
    Guney E; Tuncbag N; Keskin O; Gursoy A
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D662-6. PubMed ID: 17959648
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues.
    Keskin O; Ma B; Nussinov R
    J Mol Biol; 2005 Feb; 345(5):1281-94. PubMed ID: 15644221
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Analyses on clustering of the conserved residues at protein-RNA interfaces and its application in binding site identification.
    Yang Z; Deng X; Liu Y; Gong W; Li C
    BMC Bioinformatics; 2020 Feb; 21(1):57. PubMed ID: 32066366
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Prediction of hot spots in protein interfaces using a random forest model with hybrid features.
    Wang L; Liu ZP; Zhang XS; Chen L
    Protein Eng Des Sel; 2012 Mar; 25(3):119-26. PubMed ID: 22258275
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Analysis of single amino acid variations in singlet hot spots of protein-protein interfaces.
    Ozdemir ES; Gursoy A; Keskin O
    Bioinformatics; 2018 Sep; 34(17):i795-i801. PubMed ID: 30423104
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The subunit interfaces of weakly associated homodimeric proteins.
    Dey S; Pal A; Chakrabarti P; Janin J
    J Mol Biol; 2010 Apr; 398(1):146-60. PubMed ID: 20156457
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Protein binding hot spots and the residue-residue pairing preference: a water exclusion perspective.
    Liu Q; Li J
    BMC Bioinformatics; 2010 May; 11():244. PubMed ID: 20462403
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces.
    Ma B; Elkayam T; Wolfson H; Nussinov R
    Proc Natl Acad Sci U S A; 2003 May; 100(10):5772-7. PubMed ID: 12730379
    [TBL] [Abstract][Full Text] [Related]  

  • 14. HotRegion: a database of predicted hot spot clusters.
    Cukuroglu E; Gursoy A; Keskin O
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D829-33. PubMed ID: 22080558
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Conservation of polar residues as hot spots at protein interfaces.
    Hu Z; Ma B; Wolfson H; Nussinov R
    Proteins; 2000 Jun; 39(4):331-42. PubMed ID: 10813815
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A two-step ensemble learning for predicting protein hot spot residues from whole protein sequence.
    Yao S; Zheng C; Wang B; Chen P
    Amino Acids; 2022 May; 54(5):765-776. PubMed ID: 35098379
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Contribution of cation-π interactions to the stability of Sm/LSm oligomeric assemblies.
    Mucić ID; Nikolić MR; Stojanović SĐ
    Protoplasma; 2015 Jul; 252(4):947-58. PubMed ID: 25408427
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Cold spots are universal in protein-protein interactions.
    Gurusinghe SNS; Oppenheimer B; Shifman JM
    Protein Sci; 2022 Oct; 31(10):e4435. PubMed ID: 36173158
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Geometrically centered region: a "wet" model of protein binding hot spots not excluding water molecules.
    Li Z; Li J
    Proteins; 2010 Dec; 78(16):3304-16. PubMed ID: 20818601
    [TBL] [Abstract][Full Text] [Related]  

  • 20. 'Double water exclusion': a hypothesis refining the O-ring theory for the hot spots at protein interfaces.
    Li J; Liu Q
    Bioinformatics; 2009 Mar; 25(6):743-50. PubMed ID: 19179356
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.