These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. Comparison of rectal swab, glove tip, and participant-collected stool techniques for gut microbiome sampling. Short MI; Hudson R; Besasie BD; Reveles KR; Shah DP; Nicholson S; Johnson-Pais TL; Weldon K; Lai Z; Leach RJ; Fongang B; Liss MA BMC Microbiol; 2021 Jan; 21(1):26. PubMed ID: 33446094 [TBL] [Abstract][Full Text] [Related]
5. Reliability of a participant-friendly fecal collection method for microbiome analyses: a step towards large sample size investigation. Szopinska JW; Gresse R; van der Marel S; Boekhorst J; Lukovac S; van Swam I; Franke B; Timmerman H; Belzer C; Arias Vasquez A BMC Microbiol; 2018 Sep; 18(1):110. PubMed ID: 30189859 [TBL] [Abstract][Full Text] [Related]
6. Evaluation of fecal DNA extraction protocols for human gut microbiome studies. Lim MY; Park YS; Kim JH; Nam YD BMC Microbiol; 2020 Jul; 20(1):212. PubMed ID: 32680572 [TBL] [Abstract][Full Text] [Related]
7. Characterization of the fecal bacteria communities of forage-fed horses by pyrosequencing of 16S rRNA V4 gene amplicons. Shepherd ML; Swecker WS; Jensen RV; Ponder MA FEMS Microbiol Lett; 2012 Jan; 326(1):62-8. PubMed ID: 22092776 [TBL] [Abstract][Full Text] [Related]
8. Storage conditions of intestinal microbiota matter in metagenomic analysis. Cardona S; Eck A; Cassellas M; Gallart M; Alastrue C; Dore J; Azpiroz F; Roca J; Guarner F; Manichanh C BMC Microbiol; 2012 Jul; 12():158. PubMed ID: 22846661 [TBL] [Abstract][Full Text] [Related]
9. Processing faecal samples: a step forward for standards in microbial community analysis. Santiago A; Panda S; Mengels G; Martinez X; Azpiroz F; Dore J; Guarner F; Manichanh C BMC Microbiol; 2014 May; 14():112. PubMed ID: 24884524 [TBL] [Abstract][Full Text] [Related]
10. Differences in gut microbial composition correlate with regional brain volumes in irritable bowel syndrome. Labus JS; Hollister EB; Jacobs J; Kirbach K; Oezguen N; Gupta A; Acosta J; Luna RA; Aagaard K; Versalovic J; Savidge T; Hsiao E; Tillisch K; Mayer EA Microbiome; 2017 May; 5(1):49. PubMed ID: 28457228 [TBL] [Abstract][Full Text] [Related]
12. Fecal Aliquot Straw Technique (FAST) allows for easy and reproducible subsampling: assessing interpersonal variation in trimethylamine-N-oxide (TMAO) accumulation. Romano KA; Dill-McFarland KA; Kasahara K; Kerby RL; Vivas EI; Amador-Noguez D; Herd P; Rey FE Microbiome; 2018 May; 6(1):91. PubMed ID: 29776435 [TBL] [Abstract][Full Text] [Related]
13. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies. Hong BY; Driscoll M; Gratalo D; Jarvie T; Weinstock GM Int J Mol Sci; 2024 Mar; 25(5):. PubMed ID: 38474213 [TBL] [Abstract][Full Text] [Related]
14. Comparison of direct boiling method with commercial kits for extracting fecal microbiome DNA by Illumina sequencing of 16S rRNA tags. Peng X; Yu KQ; Deng GH; Jiang YX; Wang Y; Zhang GX; Zhou HW J Microbiol Methods; 2013 Dec; 95(3):455-62. PubMed ID: 23899773 [TBL] [Abstract][Full Text] [Related]
15. Gut microbiome analysis by post: Evaluation of the optimal method to collect stool samples from infants within a national cohort study. Williams GM; Leary SD; Ajami NJ; Chipper Keating S; Petrosin JF; Hamilton-Shield JP; Gillespie KM PLoS One; 2019; 14(6):e0216557. PubMed ID: 31188837 [TBL] [Abstract][Full Text] [Related]
16. Associations of fecal microbial profiles with breast cancer and nonmalignant breast disease in the Ghana Breast Health Study. Byrd DA; Vogtmann E; Wu Z; Han Y; Wan Y; Clegg-Lamptey JN; Yarney J; Wiafe-Addai B; Wiafe S; Awuah B; Ansong D; Nyarko K; Hullings AG; Hua X; Ahearn T; Goedert JJ; Shi J; Knight R; Figueroa JD; Brinton LA; Garcia-Closas M; Sinha R Int J Cancer; 2021 Jun; 148(11):2712-2723. PubMed ID: 33460452 [TBL] [Abstract][Full Text] [Related]
17. Fecal bacterial microbiome diversity in chronic HIV-infected patients in China. Sun Y; Ma Y; Lin P; Tang YW; Yang L; Shen Y; Zhang R; Liu L; Cheng J; Shao J; Qi T; Tang Y; Cai R; Guan L; Luo B; Sun M; Li B; Pei Z; Lu H Emerg Microbes Infect; 2016 Apr; 5(4):e31. PubMed ID: 27048741 [TBL] [Abstract][Full Text] [Related]
18. Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage. Carroll IM; Ringel-Kulka T; Siddle JP; Klaenhammer TR; Ringel Y PLoS One; 2012; 7(10):e46953. PubMed ID: 23071673 [TBL] [Abstract][Full Text] [Related]
19. Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing. Ilett EE; Jørgensen M; Noguera-Julian M; Daugaard G; Murray DD; Helleberg M; Paredes R; Lundgren J; Sengeløv H; MacPherson C Sci Rep; 2019 Sep; 9(1):13351. PubMed ID: 31527823 [TBL] [Abstract][Full Text] [Related]
20. Profiling the Gastrointestinal Microbiota. Posteraro B; De Maio F; Gasbarrini A Methods Mol Biol; 2021; 2283():83-92. PubMed ID: 33765312 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]