323 related articles for article (PubMed ID: 20684774)
1. Systematic analysis of short internal indels and their impact on protein folding.
Kim R; Guo JT
BMC Struct Biol; 2010 Aug; 10():24. PubMed ID: 20684774
[TBL] [Abstract][Full Text] [Related]
2. Indel PDB: a database of structural insertions and deletions derived from sequence alignments of closely related proteins.
Hsing M; Cherkasov A
BMC Bioinformatics; 2008 Jun; 9():293. PubMed ID: 18578882
[TBL] [Abstract][Full Text] [Related]
3. Protein expansion is primarily due to indels in intrinsically disordered regions.
Light S; Sagit R; Sachenkova O; Ekman D; Elofsson A
Mol Biol Evol; 2013 Dec; 30(12):2645-53. PubMed ID: 24037790
[TBL] [Abstract][Full Text] [Related]
4. Long indels are disordered: a study of disorder and indels in homologous eukaryotic proteins.
Light S; Sagit R; Ekman D; Elofsson A
Biochim Biophys Acta; 2013 May; 1834(5):890-7. PubMed ID: 23333420
[TBL] [Abstract][Full Text] [Related]
5. Impact of indels on the flanking regions in structural domains.
Zhang Z; Huang J; Wang Z; Wang L; Gao P
Mol Biol Evol; 2011 Jan; 28(1):291-301. PubMed ID: 20671041
[TBL] [Abstract][Full Text] [Related]
6. The combined effects of amino acid substitutions and indels on the evolution of structure within protein families.
Zhang Z; Wang Y; Wang L; Gao P
PLoS One; 2010 Dec; 5(12):e14316. PubMed ID: 21179197
[TBL] [Abstract][Full Text] [Related]
7. A role for indels in the evolution of Cro protein folds.
Stewart KL; Nelson MR; Eaton KV; Anderson WJ; Cordes MH
Proteins; 2013 Nov; 81(11):1988-96. PubMed ID: 23843258
[TBL] [Abstract][Full Text] [Related]
8. IndelFR: a database of indels in protein structures and their flanking regions.
Zhang Z; Xing C; Wang L; Gong B; Liu H
Nucleic Acids Res; 2012 Jan; 40(Database issue):D512-8. PubMed ID: 22127860
[TBL] [Abstract][Full Text] [Related]
9. Effects of short indels on protein structure and function in human genomes.
Lin M; Whitmire S; Chen J; Farrel A; Shi X; Guo JT
Sci Rep; 2017 Aug; 7(1):9313. PubMed ID: 28839204
[TBL] [Abstract][Full Text] [Related]
10. Analysis of insertions/deletions in protein structures.
Pascarella S; Argos P
J Mol Biol; 1992 Mar; 224(2):461-71. PubMed ID: 1560462
[TBL] [Abstract][Full Text] [Related]
11. Novel insights into the origin and diversification of photosynthesis based on analyses of conserved indels in the core reaction center proteins.
Khadka B; Adeolu M; Blankenship RE; Gupta RS
Photosynth Res; 2017 Feb; 131(2):159-171. PubMed ID: 27638319
[TBL] [Abstract][Full Text] [Related]
12. The unfoldomics decade: an update on intrinsically disordered proteins.
Dunker AK; Oldfield CJ; Meng J; Romero P; Yang JY; Chen JW; Vacic V; Obradovic Z; Uversky VN
BMC Genomics; 2008 Sep; 9 Suppl 2(Suppl 2):S1. PubMed ID: 18831774
[TBL] [Abstract][Full Text] [Related]
13. Characterization of parasite-specific indels and their proposed relevance for selective anthelminthic drug targeting.
Wang Q; Heizer E; Rosa BA; Wildman SA; Janetka JW; Mitreva M
Infect Genet Evol; 2016 Apr; 39():201-211. PubMed ID: 26829384
[TBL] [Abstract][Full Text] [Related]
14. Iterative sequence/secondary structure search for protein homologs: comparison with amino acid sequence alignments and application to fold recognition in genome databases.
Wallqvist A; Fukunishi Y; Murphy LR; Fadel A; Levy RM
Bioinformatics; 2000 Nov; 16(11):988-1002. PubMed ID: 11159310
[TBL] [Abstract][Full Text] [Related]
15. Sequence and structural analysis of cellular retinoic acid-binding proteins reveals a network of conserved hydrophobic interactions.
Gunasekaran K; Hagler AT; Gierasch LM
Proteins; 2004 Feb; 54(2):179-94. PubMed ID: 14696180
[TBL] [Abstract][Full Text] [Related]
16. Evolution of protein indels in plants, animals and fungi.
Ajawatanawong P; Baldauf SL
BMC Evol Biol; 2013 Jul; 13():140. PubMed ID: 23826714
[TBL] [Abstract][Full Text] [Related]
17. Elucidating the Structural Impacts of Protein InDels.
Jilani M; Turcan A; Haspel N; Jagodzinski F
Biomolecules; 2022 Oct; 12(10):. PubMed ID: 36291643
[TBL] [Abstract][Full Text] [Related]
18. SIFT Indel: predictions for the functional effects of amino acid insertions/deletions in proteins.
Hu J; Ng PC
PLoS One; 2013; 8(10):e77940. PubMed ID: 24194902
[TBL] [Abstract][Full Text] [Related]
19. Contributions of substitutions and indels to the structural variations in ancient protein superfamilies.
Zhang Z; Wang J; Gong Y; Li Y
BMC Genomics; 2018 Oct; 19(1):771. PubMed ID: 30355304
[TBL] [Abstract][Full Text] [Related]
20. Empirical and structural models for insertions and deletions in the divergent evolution of proteins.
Benner SA; Cohen MA; Gonnet GH
J Mol Biol; 1993 Feb; 229(4):1065-82. PubMed ID: 8445636
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]