These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

178 related articles for article (PubMed ID: 20689681)

  • 1. RNA structural motifs that entail hydrogen bonds involving sugar-phosphate backbone atoms of RNA.
    Ulyanov NB; James TL
    New J Chem; 2010 May; 34(5):910-917. PubMed ID: 20689681
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A molecular dynamics simulation of the flavin mononucleotide-RNA aptamer complex.
    Schneider C; Sühnel J
    Biopolymers; 1999 Sep; 50(3):287-302. PubMed ID: 10397790
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The significance of the 2' OH group and the influence of cations on the secondary structure of the RNA backbone.
    Kölkenbeck K; Zundel G
    Biophys Struct Mech; 1975 May; 1(3):203-19. PubMed ID: 1234026
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Crystal structure of RNase T1 complexed with the product nucleotide 3'-GMP. Structural evidence for direct interaction of histidine 40 and glutamic acid 58 with the 2'-hydroxyl group of the ribose.
    Gohda K; Oka K; Tomita K; Hakoshima T
    J Biol Chem; 1994 Jul; 269(26):17531-6. PubMed ID: 7912696
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Statistical analysis of atomic contacts at RNA-protein interfaces.
    Treger M; Westhof E
    J Mol Recognit; 2001; 14(4):199-214. PubMed ID: 11500966
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Understanding the Sequence Preference of Recurrent RNA Building Blocks using Quantum Chemistry: The Intrastrand RNA Dinucleotide Platform.
    Mládek A; Sponer JE; Kulhánek P; Lu XJ; Olson WK; Sponer J
    J Chem Theory Comput; 2012 Jan; 8(1):335-347. PubMed ID: 22712001
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Deterministic features of side-chain main-chain hydrogen bonds in globular protein structures.
    Eswar N; Ramakrishnan C
    Protein Eng; 2000 Apr; 13(4):227-38. PubMed ID: 10810153
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Intramolecular CH···O hydrogen bonds in the AI and BI DNA-like conformers of canonical nucleosides and their Watson-Crick pairs. Quantum chemical and AIM analysis.
    Yurenko YP; Zhurakivsky RO; Samijlenko SP; Hovorun DM
    J Biomol Struct Dyn; 2011 Aug; 29(1):51-65. PubMed ID: 21696225
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Rules governing the orientation of the 2'-hydroxyl group in RNA.
    Auffinger P; Westhof E
    J Mol Biol; 1997 Nov; 274(1):54-63. PubMed ID: 9398515
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Analysis of the less common hydrogen bonds involving ester oxygen sp3 atoms as acceptors in the crystal structures of small organic molecules.
    Molcanov K; Kojić-Prodić B; Raos N
    Acta Crystallogr B; 2004 Aug; 60(Pt 4):424-32. PubMed ID: 15258400
    [TBL] [Abstract][Full Text] [Related]  

  • 11. [Intramolecular hygrogen bonds in conformers of 2'-deoxycytidine: results of quantum-chemical analysis of electron density topology].
    Zhurakivs'kyĭ RO; Hovorun DM
    Ukr Biokhim Zh (1999); 2006; 78(6):70-7. PubMed ID: 17494321
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Occurrence and stability of lone pair-π stacking interactions between ribose and nucleobases in functional RNAs.
    Chawla M; Chermak E; Zhang Q; Bujnicki JM; Oliva R; Cavallo L
    Nucleic Acids Res; 2017 Nov; 45(19):11019-11032. PubMed ID: 28977572
    [TBL] [Abstract][Full Text] [Related]  

  • 13. NMR experiments for the rapid identification of P=O···H-X type hydrogen bonds in nucleic acids.
    Duchardt-Ferner E; Wöhnert J
    J Biomol NMR; 2017 Oct; 69(2):101-110. PubMed ID: 29032519
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks.
    Butcher SE; Pyle AM
    Acc Chem Res; 2011 Dec; 44(12):1302-11. PubMed ID: 21899297
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sequence and structural conservation in RNA ribose zippers.
    Tamura M; Holbrook SR
    J Mol Biol; 2002 Jul; 320(3):455-74. PubMed ID: 12096903
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Ab initio comprehensive conformational analysis of 2'-deoxyuridine, the biologically significant DNA minor nucleoside, and reconstruction of its low-temperature matrix infrared spectrum.
    Yurenko YP; Zhurakivsky RO; Ghomi M; Samijlenko SP; Hovorun DM
    J Phys Chem B; 2008 Jan; 112(4):1240-50. PubMed ID: 18092770
    [TBL] [Abstract][Full Text] [Related]  

  • 17. HBexplore--a new tool for identifying and analysing hydrogen bonding patterns in biological macromolecules.
    Lindauer K; Bendic C; Sühnel J
    Comput Appl Biosci; 1996 Aug; 12(4):281-9. PubMed ID: 8902354
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Cryo neutron crystallography demonstrates influence of RNA 2'-OH orientation on conformation, sugar pucker and water structure.
    Harp JM; Lybrand TP; Pallan PS; Coates L; Sullivan B; Egli M
    Nucleic Acids Res; 2022 Jul; 50(13):7721-7738. PubMed ID: 35819202
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The occurence of the syn-C3' endo conformation and the distorted backbone conformations for C4'-C5' and P-O5' in oligo and polynucleotides.
    Vasudevan SS; Sundaralingam M
    J Biomol Struct Dyn; 2001 Jun; 18(6):824-31. PubMed ID: 11444371
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Conformational properties of branched RNA fragments in aqueous solution.
    Damha MJ; Ogilvie KK
    Biochemistry; 1988 Aug; 27(17):6403-16. PubMed ID: 2464368
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.