469 related articles for article (PubMed ID: 20733244)
1. A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.
Wang J; Li M; Chen J; Pan Y
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(3):607-20. PubMed ID: 20733244
[TBL] [Abstract][Full Text] [Related]
2. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
Ibrahim ZM; Ngom A
BMC Bioinformatics; 2015; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
[TBL] [Abstract][Full Text] [Related]
3. Identification of hierarchical and overlapping functional modules in PPI networks.
Wang J; Ren J; Li M; Wu FX
IEEE Trans Nanobioscience; 2012 Dec; 11(4):386-93. PubMed ID: 22955967
[TBL] [Abstract][Full Text] [Related]
4. Modular organization of protein interaction networks.
Luo F; Yang Y; Chen CF; Chang R; Zhou J; Scheuermann RH
Bioinformatics; 2007 Jan; 23(2):207-14. PubMed ID: 17092991
[TBL] [Abstract][Full Text] [Related]
5. Integrated analysis of multiple data sources reveals modular structure of biological networks.
Lu H; Shi B; Wu G; Zhang Y; Zhu X; Zhang Z; Liu C; Zhao Y; Wu T; Wang J; Chen R
Biochem Biophys Res Commun; 2006 Jun; 345(1):302-9. PubMed ID: 16690033
[TBL] [Abstract][Full Text] [Related]
6. Identification of functional modules in a PPI network by clique percolation clustering.
Zhang S; Ning X; Zhang XS
Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
[TBL] [Abstract][Full Text] [Related]
7. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
He J; Li C; Ye B; Zhong W
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
[TBL] [Abstract][Full Text] [Related]
8. AVID: an integrative framework for discovering functional relationships among proteins.
Jiang T; Keating AE
BMC Bioinformatics; 2005 Jun; 6():136. PubMed ID: 15929793
[TBL] [Abstract][Full Text] [Related]
9. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
Li M; Wu X; Wang J; Pan Y
BMC Bioinformatics; 2012 May; 13():109. PubMed ID: 22621308
[TBL] [Abstract][Full Text] [Related]
10. A hybrid clustering algorithm for identifying modules in Protein-Protein Interaction networks.
Yu L; Gao L; Sun PG
Int J Data Min Bioinform; 2010; 4(5):600-15. PubMed ID: 21133044
[TBL] [Abstract][Full Text] [Related]
11. Identification of essential proteins from weighted protein-protein interaction networks.
Li M; Wang JX; Wang H; Pan Y
J Bioinform Comput Biol; 2013 Jun; 11(3):1341002. PubMed ID: 23796179
[TBL] [Abstract][Full Text] [Related]
12. Detecting functional modules in the yeast protein-protein interaction network.
Chen J; Yuan B
Bioinformatics; 2006 Sep; 22(18):2283-90. PubMed ID: 16837529
[TBL] [Abstract][Full Text] [Related]
13. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
Xu B; Guan J
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(4):616-27. PubMed ID: 26356332
[TBL] [Abstract][Full Text] [Related]
14. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
Theofilatos K; Pavlopoulou N; Papasavvas C; Likothanassis S; Dimitrakopoulos C; Georgopoulos E; Moschopoulos C; Mavroudi S
Artif Intell Med; 2015 Mar; 63(3):181-9. PubMed ID: 25765008
[TBL] [Abstract][Full Text] [Related]
15. Functional annotation of hierarchical modularity.
Padmanabhan K; Wang K; Samatova NF
PLoS One; 2012; 7(4):e33744. PubMed ID: 22496762
[TBL] [Abstract][Full Text] [Related]
16. Detection of functional modules from protein interaction networks with an enhanced random walk based algorithm.
Cai B; Wang H; Zheng H; Wang H
Int J Comput Biol Drug Des; 2011; 4(3):290-306. PubMed ID: 21778561
[TBL] [Abstract][Full Text] [Related]
17. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
Yu L; Gao L; Li K; Zhao Y; Chiu DK
Comput Biol Chem; 2011 Oct; 35(5):298-307. PubMed ID: 22000801
[TBL] [Abstract][Full Text] [Related]
18. Fast and accurate method for identifying high-quality protein-interaction modules by clique merging and its application to yeast.
Zhang C; Liu S; Zhou Y
J Proteome Res; 2006 Apr; 5(4):801-7. PubMed ID: 16602686
[TBL] [Abstract][Full Text] [Related]
19. Evaluation of clustering algorithms for protein-protein interaction networks.
Brohée S; van Helden J
BMC Bioinformatics; 2006 Nov; 7():488. PubMed ID: 17087821
[TBL] [Abstract][Full Text] [Related]
20. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
Ou-Yang L; Yan H; Zhang XF
BMC Bioinformatics; 2017 Dec; 18(Suppl 13):463. PubMed ID: 29219066
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]