BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 20825249)

  • 21. Solution conformation of the (+)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M; Fiala R; Hingerty BE; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1994 Sep; 33(38):11507-17. PubMed ID: 7918364
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Synthesis and proton-NMR studies of oligonucleotides containing an apurinic (AP) site.
    Raap J; Dreef CE; van der Marel GA; van Boom JH; Hilbers CW
    J Biomol Struct Dyn; 1987 Oct; 5(2):219-47. PubMed ID: 2856028
    [TBL] [Abstract][Full Text] [Related]  

  • 23. NMR studies of abasic sites in DNA duplexes: deoxyadenosine stacks into the helix opposite the cyclic analogue of 2-deoxyribose.
    Kalnik MW; Chang CN; Grollman AP; Patel DJ
    Biochemistry; 1988 Feb; 27(3):924-31. PubMed ID: 3259144
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Covalent carcinogenic lesions in DNA: NMR studies of O6-methylguanosine containing oligonucleotide duplexes.
    Patel DJ; Shapiro L; Kozlowski SA; Gaffney BL; Kuzmich S; Jones RA
    Biochimie; 1985; 67(7-8):861-86. PubMed ID: 4084607
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Common Kinetic Mechanism of Abasic Site Recognition by Structurally Different Apurinic/Apyrimidinic Endonucleases.
    Kuznetsova AA; Senchurova SI; Ishchenko AA; Saparbaev M; Fedorova OS; Kuznetsov NA
    Int J Mol Sci; 2021 Aug; 22(16):. PubMed ID: 34445579
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Solution conformation of the (-)-trans-anti-5-methylchrysene-dG adduct opposite dC in a DNA duplex: DNA bending associated with wedging of the methyl group of 5-methylchrysene to the 3'-side of the modification site.
    Cosman M; Xu R; Hingerty BE; Amin S; Harvey RG; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1995 May; 34(18):6247-60. PubMed ID: 7742330
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Solution structure of duplex DNA containing an extrahelical abasic site analog determined by NMR spectroscopy and molecular dynamics.
    Lin Z; Hung KN; Grollman AP; de los Santos C
    Nucleic Acids Res; 1998 May; 26(10):2385-91. PubMed ID: 9580690
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Repair Rate of Clustered Abasic DNA Lesions by Human Endonuclease: Molecular Bases of Sequence Specificity.
    Gattuso H; Durand E; Bignon E; Morell C; Georgakilas AG; Dumont E; Chipot C; Dehez F; Monari A
    J Phys Chem Lett; 2016 Oct; 7(19):3760-3765. PubMed ID: 27612215
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Efficiency of repair of an abasic site within DNA clustered damage sites by mammalian cell nuclear extracts.
    Lomax ME; Cunniffe S; O'Neill P
    Biochemistry; 2004 Aug; 43(34):11017-26. PubMed ID: 15323560
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Impact of bistrand abasic sites and proximate orientation on DNA global structure and duplex energetics.
    Minetti CA; Sun JY; Jacobs DP; Kang I; Remeta DP; Breslauer KJ
    Biopolymers; 2018 Aug; 109(8):e23098. PubMed ID: 29322505
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Solution conformation of [AF]dG opposite a -1 deletion site in a DNA duplex: intercalation of the covalently attached aminofluorene ring into the helix with base displacement of the C8-modified Syn guanine into the major groove.
    Mao B; Cosman M; Hingerty BE; Broyde S; Patel DJ
    Biochemistry; 1995 May; 34(18):6226-38. PubMed ID: 7742328
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine.
    Cosman M; de los Santos C; Fiala R; Hingerty BE; Ibanez V; Luna E; Harvey R; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1993 Apr; 32(16):4145-55. PubMed ID: 8476845
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Oligonucleotides with bistranded abasic sites interfere with substrate binding and catalysis by human apurinic/apyrimidinic endonuclease.
    McKenzie JA; Strauss PR
    Biochemistry; 2001 Nov; 40(44):13254-61. PubMed ID: 11683634
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Solution structure of a DNA duplex containing 8-hydroxy-2'-deoxyguanosine opposite deoxyguanosine.
    Thiviyanathan V; Somasunderam A; Hazra TK; Mitra S; Gorenstein DG
    J Mol Biol; 2003 Jan; 325(3):433-42. PubMed ID: 12498794
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Solution structure of the luzopeptin-DNA complex.
    Zhang XL; Patel DJ
    Biochemistry; 1991 Apr; 30(16):4026-41. PubMed ID: 1850297
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Solution structure of a trans-opened (10S)-dA adduct of (+)-(7S,8R,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a fully complementary DNA duplex: evidence for a major syn conformation.
    Pradhan P; Tirumala S; Liu X; Sayer JM; Jerina DM; Yeh HJ
    Biochemistry; 2001 May; 40(20):5870-81. PubMed ID: 11352722
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Solution structure of a trinucleotide A-T-A bulge loop within a DNA duplex.
    Rosen MA; Shapiro L; Patel DJ
    Biochemistry; 1992 Apr; 31(16):4015-26. PubMed ID: 1314655
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Solution conformation of the (+)-cis-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Cosman M; Fiala R; Hingerty BE; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1994 Sep; 33(38):11518-27. PubMed ID: 7918365
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Solution structures of aminofluorene [AF]-stacked conformers of the syn [AF]-C8-dG adduct positioned opposite dC or dA at a template-primer junction.
    Gu Z; Gorin A; Hingerty BE; Broyde S; Patel DJ
    Biochemistry; 1999 Aug; 38(33):10855-70. PubMed ID: 10451382
    [TBL] [Abstract][Full Text] [Related]  

  • 40. The Role of Active-Site Plasticity in Damaged-Nucleotide Recognition by Human Apurinic/Apyrimidinic Endonuclease APE1.
    Bulygin AA; Kuznetsova AA; Vorobjev YN; Fedorova OS; A Kuznetsov N
    Molecules; 2020 Aug; 25(17):. PubMed ID: 32872297
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.