These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
235 related articles for article (PubMed ID: 20843778)
61. On the approximation of optimal structures for RNA-RNA interaction. Mneimneh S IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(4):682-8. PubMed ID: 19875865 [TBL] [Abstract][Full Text] [Related]
65. Bayesian sampling of evolutionarily conserved RNA secondary structures with pseudoknots. Doose G; Metzler D Bioinformatics; 2012 Sep; 28(17):2242-8. PubMed ID: 22796961 [TBL] [Abstract][Full Text] [Related]
66. Direct Inference of Base-Pairing Probabilities with Neural Networks Improves Prediction of RNA Secondary Structures with Pseudoknots. Akiyama M; Sakakibara Y; Sato K Genes (Basel); 2022 Nov; 13(11):. PubMed ID: 36421829 [TBL] [Abstract][Full Text] [Related]
67. Local RNA structure alignment with incomplete sequence. Kolbe DL; Eddy SR Bioinformatics; 2009 May; 25(10):1236-43. PubMed ID: 19304875 [TBL] [Abstract][Full Text] [Related]
70. Capturing alternative secondary structures of RNA by decomposition of base-pairing probabilities. Hagio T; Sakuraba S; Iwakiri J; Mori R; Asai K BMC Bioinformatics; 2018 Feb; 19(Suppl 1):38. PubMed ID: 29504917 [TBL] [Abstract][Full Text] [Related]
71. Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities. Roshan U; Chikkagoudar S; Livesay DR BMC Bioinformatics; 2008 Jan; 9():61. PubMed ID: 18226231 [TBL] [Abstract][Full Text] [Related]
72. RNA independent fragment partition method based on deep learning for RNA secondary structure prediction. Zhao Q; Mao Q; Zhao Z; Yuan W; He Q; Sun Q; Yao Y; Fan X Sci Rep; 2023 Feb; 13(1):2861. PubMed ID: 36801945 [TBL] [Abstract][Full Text] [Related]
73. Maximum expected accuracy structural neighbors of an RNA secondary structure. Clote P; Lou F; Lorenz WA BMC Bioinformatics; 2012 Apr; 13 Suppl 5(Suppl 5):S6. PubMed ID: 22537010 [TBL] [Abstract][Full Text] [Related]
74. Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots. Song Y; Liu C; Malmberg RL; He C; Cai L Int J Bioinform Res Appl; 2006; 2(3):289-304. PubMed ID: 18048167 [TBL] [Abstract][Full Text] [Related]
77. ConsAlifold: considering RNA structural alignments improves prediction accuracy of RNA consensus secondary structures. Tagashira M; Asai K Bioinformatics; 2022 Jan; 38(3):710-719. PubMed ID: 34694364 [TBL] [Abstract][Full Text] [Related]
78. RADAR: a web server for RNA data analysis and research. Khaladkar M; Bellofatto V; Wang JT; Tian B; Shapiro BA Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W300-4. PubMed ID: 17517784 [TBL] [Abstract][Full Text] [Related]
79. Prediction of RNA secondary structure by maximizing pseudo-expected accuracy. Hamada M; Sato K; Asai K BMC Bioinformatics; 2010 Nov; 11():586. PubMed ID: 21118522 [TBL] [Abstract][Full Text] [Related]