113 related articles for article (PubMed ID: 20856958)
1. A comparative analysis of the role of water in the binding pockets of ionotropic glutamate receptors.
Vijayan R; Sahai MA; Czajkowski T; Biggin PC
Phys Chem Chem Phys; 2010 Nov; 12(42):14057-66. PubMed ID: 20856958
[TBL] [Abstract][Full Text] [Related]
2. Structural and dynamic roles of permanent water molecules in ligand molecular recognition by chicken liver bile acid binding protein.
Ricchiuto P; Rocco AG; Gianazza E; Corrada D; Beringhelli T; Eberini I
J Mol Recognit; 2008; 21(5):348-54. PubMed ID: 18654997
[TBL] [Abstract][Full Text] [Related]
3. Structural and pharmacological characterization of phenylalanine-based AMPA receptor antagonists at kainate receptors.
Venskutonytė R; Frydenvang K; Valadés EA; Szymańska E; Johansen TN; Kastrup JS; Pickering DS
ChemMedChem; 2012 Oct; 7(10):1793-8. PubMed ID: 22407805
[TBL] [Abstract][Full Text] [Related]
4. Mechanisms for ligand binding to GluR0 ion channels: crystal structures of the glutamate and serine complexes and a closed apo state.
Mayer ML; Olson R; Gouaux E
J Mol Biol; 2001 Aug; 311(4):815-36. PubMed ID: 11518533
[TBL] [Abstract][Full Text] [Related]
5. Lessons from more than 80 structures of the GluA2 ligand-binding domain in complex with agonists, antagonists and allosteric modulators.
Pøhlsgaard J; Frydenvang K; Madsen U; Kastrup JS
Neuropharmacology; 2011 Jan; 60(1):135-50. PubMed ID: 20713069
[TBL] [Abstract][Full Text] [Related]
6. Pharmacological and structural characterization of conformationally restricted (S)-glutamate analogues at ionotropic glutamate receptors.
Juknaitė L; Venskutonytė R; Assaf Z; Faure S; Gefflaut T; Aitken DJ; Nielsen B; Gajhede M; Kastrup JS; Bunch L; Frydenvang K; Pickering DS
J Struct Biol; 2012 Oct; 180(1):39-46. PubMed ID: 22789682
[TBL] [Abstract][Full Text] [Related]
7. Binding site and interlobe interactions of the ionotropic glutamate receptor GluK3 ligand binding domain revealed by high resolution crystal structure in complex with (S)-glutamate.
Venskutonytė R; Frydenvang K; Gajhede M; Bunch L; Pickering DS; Kastrup JS
J Struct Biol; 2011 Dec; 176(3):307-14. PubMed ID: 21907808
[TBL] [Abstract][Full Text] [Related]
8. Neurosteroid binding to the amino terminal and glutamate binding domains of ionotropic glutamate receptors.
Cameron K; Bartle E; Roark R; Fanelli D; Pham M; Pollard B; Borkowski B; Rhoads S; Kim J; Rocha M; Kahlson M; Kangala M; Gentile L
Steroids; 2012 Jun; 77(7):774-9. PubMed ID: 22504555
[TBL] [Abstract][Full Text] [Related]
9. Full and partial agonism of ionotropic glutamate receptors indicated by molecular dynamics simulations.
Postila PA; Ylilauri M; Pentikäinen OT
J Chem Inf Model; 2011 May; 51(5):1037-47. PubMed ID: 21500800
[TBL] [Abstract][Full Text] [Related]
10. Probing the dynamic nature of water molecules and their influences on ligand binding in a model binding site.
Cappel D; Wahlström R; Brenk R; Sotriffer CA
J Chem Inf Model; 2011 Oct; 51(10):2581-94. PubMed ID: 21916516
[TBL] [Abstract][Full Text] [Related]
11. Ionotropic glutamate receptor recognition and activation.
Oswald RE
Adv Protein Chem; 2004; 68():313-49. PubMed ID: 15500865
[TBL] [Abstract][Full Text] [Related]
12. Binding site flexibility: molecular simulation of partial and full agonists within a glutamate receptor.
Arinaminpathy Y; Sansom MS; Biggin PC
Mol Pharmacol; 2006 Jan; 69(1):11-8. PubMed ID: 16219907
[TBL] [Abstract][Full Text] [Related]
13. On the binding determinants of the glutamate agonist with the glutamate receptor ligand binding domain.
Speranskiy K; Kurnikova M
Biochemistry; 2005 Aug; 44(34):11508-17. PubMed ID: 16114887
[TBL] [Abstract][Full Text] [Related]
14. Synthesis of new isoxazoline-based acidic amino acids and investigation of their affinity and selectivity profile at ionotropic glutamate receptors.
Pinto A; Conti P; Grazioso G; Tamborini L; Madsen U; Nielsen B; De Micheli C
Eur J Med Chem; 2011 Feb; 46(2):787-93. PubMed ID: 21220180
[TBL] [Abstract][Full Text] [Related]
15. Crystal structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with L-glutamate: structural dissection of the ligand interaction and subunit interface.
Lee JH; Kang GB; Lim HH; Jin KS; Kim SH; Ree M; Park CS; Kim SJ; Eom SH
J Mol Biol; 2008 Feb; 376(2):308-16. PubMed ID: 18164033
[TBL] [Abstract][Full Text] [Related]
16. Computational sampling of a cryptic drug binding site in a protein receptor: explicit solvent molecular dynamics and inhibitor docking to p38 MAP kinase.
Frembgen-Kesner T; Elcock AH
J Mol Biol; 2006 May; 359(1):202-14. PubMed ID: 16616932
[TBL] [Abstract][Full Text] [Related]
17. Crystal structure of a glutamate/aspartate binding protein complexed with a glutamate molecule: structural basis of ligand specificity at atomic resolution.
Hu Y; Fan CP; Fu G; Zhu D; Jin Q; Wang DC
J Mol Biol; 2008 Sep; 382(1):99-111. PubMed ID: 18640128
[TBL] [Abstract][Full Text] [Related]
18. Conformational dynamics of the estrogen receptor alpha: molecular dynamics simulations of the influence of binding site structure on protein dynamics.
Celik L; Lund JD; Schiøtt B
Biochemistry; 2007 Feb; 46(7):1743-58. PubMed ID: 17249692
[TBL] [Abstract][Full Text] [Related]
19. Substrate binding and catalytic mechanism in phospholipase C from Bacillus cereus: a molecular mechanics and molecular dynamics study.
da Graça Thrige D; Buur JR; Jørgensen FS
Biopolymers; 1997 Sep; 42(3):319-36. PubMed ID: 9279125
[TBL] [Abstract][Full Text] [Related]
20. Dynamics and allostery of the ionotropic glutamate receptors and the ligand binding domain.
Tobi D
Proteins; 2016 Feb; 84(2):267-77. PubMed ID: 26677170
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
