BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 20864445)

  • 1. A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species.
    Liu S; Lin L; Jiang P; Wang D; Xing Y
    Nucleic Acids Res; 2011 Jan; 39(2):578-88. PubMed ID: 20864445
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A large-scale comparative study of isoform expressions measured on four platforms.
    Zhang W; Petegrosso R; Chang JW; Sun J; Yong J; Chien J; Kuang R
    BMC Genomics; 2020 Mar; 21(1):272. PubMed ID: 32228441
    [TBL] [Abstract][Full Text] [Related]  

  • 3. RNA-Seq versus oligonucleotide array assessment of dose-dependent TCDD-elicited hepatic gene expression in mice.
    Nault R; Fader KA; Zacharewski T
    BMC Genomics; 2015 May; 16(1):373. PubMed ID: 25958198
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A semi-parametric statistical model for integrating gene expression profiles across different platforms.
    Lyu Y; Li Q
    BMC Bioinformatics; 2016 Jan; 17 Suppl 1(Suppl 1):5. PubMed ID: 26818110
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.
    SEQC/MAQC-III Consortium
    Nat Biotechnol; 2014 Sep; 32(9):903-14. PubMed ID: 25150838
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Differential expression in RNA-seq: a matter of depth.
    Tarazona S; García-Alcalde F; Dopazo J; Ferrer A; Conesa A
    Genome Res; 2011 Dec; 21(12):2213-23. PubMed ID: 21903743
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Exon array data analysis using Affymetrix power tools and R statistical software.
    Lockstone HE
    Brief Bioinform; 2011 Nov; 12(6):634-44. PubMed ID: 21498550
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Investigation of factors affecting RNA-seq gene expression calls.
    Harati S; Phan JH; Wang MD
    Annu Int Conf IEEE Eng Med Biol Soc; 2014; 2014():5232-5. PubMed ID: 25571173
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Robust principal component analysis for accurate outlier sample detection in RNA-Seq data.
    Chen X; Zhang B; Wang T; Bonni A; Zhao G
    BMC Bioinformatics; 2020 Jun; 21(1):269. PubMed ID: 32600248
    [TBL] [Abstract][Full Text] [Related]  

  • 10. RNA-seq: from technology to biology.
    Marguerat S; Bähler J
    Cell Mol Life Sci; 2010 Feb; 67(4):569-79. PubMed ID: 19859660
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sample size calculation for differential expression analysis of RNA-seq data under Poisson distribution.
    Li CI; Su PF; Guo Y; Shyr Y
    Int J Comput Biol Drug Des; 2013; 6(4):358-75. PubMed ID: 24088268
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNA-seq: technical variability and sampling.
    McIntyre LM; Lopiano KK; Morse AM; Amin V; Oberg AL; Young LJ; Nuzhdin SV
    BMC Genomics; 2011 Jun; 12():293. PubMed ID: 21645359
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNA-Seq: Improving Our Understanding of Retinal Biology and Disease.
    Farkas MH; Au ED; Sousa ME; Pierce EA
    Cold Spring Harb Perspect Med; 2015 Feb; 5(9):a017152. PubMed ID: 25722474
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Methodological considerations for gene expression profiling of human brain.
    Atz M; Walsh D; Cartagena P; Li J; Evans S; Choudary P; Overman K; Stein R; Tomita H; Potkin S; Myers R; Watson SJ; Jones EG; Akil H; Bunney WE; Vawter MP;
    J Neurosci Methods; 2007 Jul; 163(2):295-309. PubMed ID: 17512057
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detecting and correcting systematic variation in large-scale RNA sequencing data.
    Li S; Łabaj PP; Zumbo P; Sykacek P; Shi W; Shi L; Phan J; Wu PY; Wang M; Wang C; Thierry-Mieg D; Thierry-Mieg J; Kreil DP; Mason CE
    Nat Biotechnol; 2014 Sep; 32(9):888-95. PubMed ID: 25150837
    [TBL] [Abstract][Full Text] [Related]  

  • 16. RNAflow: An Effective and Simple RNA-Seq Differential Gene Expression Pipeline Using Nextflow.
    Lataretu M; Hölzer M
    Genes (Basel); 2020 Dec; 11(12):. PubMed ID: 33322033
    [TBL] [Abstract][Full Text] [Related]  

  • 17. RNA-sequencing analysis of HepG2 cells treated with atorvastatin.
    Stormo C; Kringen MK; Lyle R; Olstad OK; Sachse D; Berg JP; Piehler AP
    PLoS One; 2014; 9(8):e105836. PubMed ID: 25153832
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Antiviral restriction factor transgenesis in the domestic cat.
    Wongsrikeao P; Saenz D; Rinkoski T; Otoi T; Poeschla E
    Nat Methods; 2011 Sep; 8(10):853-9. PubMed ID: 21909101
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Making a definitive diagnosis: successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease.
    Worthey EA; Mayer AN; Syverson GD; Helbling D; Bonacci BB; Decker B; Serpe JM; Dasu T; Tschannen MR; Veith RL; Basehore MJ; Broeckel U; Tomita-Mitchell A; Arca MJ; Casper JT; Margolis DA; Bick DP; Hessner MJ; Routes JM; Verbsky JW; Jacob HJ; Dimmock DP
    Genet Med; 2011 Mar; 13(3):255-62. PubMed ID: 21173700
    [TBL] [Abstract][Full Text] [Related]  

  • 20. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.
    Kim D; Pertea G; Trapnell C; Pimentel H; Kelley R; Salzberg SL
    Genome Biol; 2013 Apr; 14(4):R36. PubMed ID: 23618408
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.