BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

134 related articles for article (PubMed ID: 20865487)

  • 21. Efficient sequential and parallel algorithms for planted motif search.
    Nicolae M; Rajasekaran S
    BMC Bioinformatics; 2014 Jan; 15():34. PubMed ID: 24479443
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A hybrid method for the exact planted (l, d) motif finding problem and its parallelization.
    Abbas MM; Abouelhoda M; Bahig HM
    BMC Bioinformatics; 2012; 13 Suppl 17(Suppl 17):S10. PubMed ID: 23281969
    [TBL] [Abstract][Full Text] [Related]  

  • 23. On counting position weight matrix matches in a sequence, with application to discriminative motif finding.
    Sinha S
    Bioinformatics; 2006 Jul; 22(14):e454-63. PubMed ID: 16873507
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Hybrid Gibbs-sampling algorithm for challenging motif discovery: GibbsDST.
    Shida K
    Genome Inform; 2006; 17(2):3-13. PubMed ID: 17503374
    [TBL] [Abstract][Full Text] [Related]  

  • 25. PMS5: an efficient exact algorithm for the (ℓ, d)-motif finding problem.
    Dinh H; Rajasekaran S; Kundeti VK
    BMC Bioinformatics; 2011 Oct; 12():410. PubMed ID: 22024209
    [TBL] [Abstract][Full Text] [Related]  

  • 26. cWINNOWER algorithm for finding fuzzy dna motifs.
    Liang S; Samanta MP; Biegel BA
    J Bioinform Comput Biol; 2004 Mar; 2(1):47-60. PubMed ID: 15272432
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Searching maximal degenerate motifs guided by a compact suffix tree.
    Jiang H; Zhao Y; Chen W; Zheng W
    Adv Exp Med Biol; 2010; 680():19-26. PubMed ID: 20865482
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A mini-greedy algorithm for faster structural RNA stem-loop search.
    Gorodkin J; Lyngso RB; Stormo GD
    Genome Inform; 2001; 12():184-93. PubMed ID: 11791237
    [TBL] [Abstract][Full Text] [Related]  

  • 29. qPMS7: a fast algorithm for finding (ℓ, d)-motifs in DNA and protein sequences.
    Dinh H; Rajasekaran S; Davila J
    PLoS One; 2012; 7(7):e41425. PubMed ID: 22848493
    [TBL] [Abstract][Full Text] [Related]  

  • 30. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND; Casimiro AC; Santos PM; Sá-Correia I; Oliveira AL; Freitas AT
    Bioinformatics; 2006 Dec; 22(24):2996-3002. PubMed ID: 17068086
    [TBL] [Abstract][Full Text] [Related]  

  • 31. An Algorithm for Motif Discovery with Iteration on Lengths of Motifs.
    Fan Y; Wu W; Yang J; Yang W; Liu R
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(1):136-41. PubMed ID: 26357084
    [TBL] [Abstract][Full Text] [Related]  

  • 32. PairMotif+: a fast and effective algorithm for de novo motif discovery in DNA sequences.
    Yu Q; Huo H; Zhang Y; Guo H; Guo H
    Int J Biol Sci; 2013; 9(4):412-24. PubMed ID: 23678291
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Algorithms for challenging motif problems.
    Leung HC; Chin FY
    J Bioinform Comput Biol; 2006 Feb; 4(1):43-58. PubMed ID: 16568541
    [TBL] [Abstract][Full Text] [Related]  

  • 34. PMS6: a fast algorithm for motif discovery.
    Bandyopadhyay S; Sahni S; Rajasekaran S
    Int J Bioinform Res Appl; 2014; 10(4-5):369-83. PubMed ID: 24989858
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Exact algorithms for planted motif problems.
    Rajasekaran S; Balla S; Huang CH
    J Comput Biol; 2005 Oct; 12(8):1117-28. PubMed ID: 16241901
    [TBL] [Abstract][Full Text] [Related]  

  • 36. PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny.
    Siddharthan R; Siggia ED; van Nimwegen E
    PLoS Comput Biol; 2005 Dec; 1(7):e67. PubMed ID: 16477324
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A Monte Carlo EM algorithm for de novo motif discovery in biomolecular sequences.
    Bi C
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(3):370-86. PubMed ID: 19644166
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A parallel and incremental algorithm for efficient unique signature discovery on DNA databases.
    Lee HP; Sheu TF; Tang CY
    BMC Bioinformatics; 2010 Mar; 11():132. PubMed ID: 20230647
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Evaluating DNA sequence searching algorithms on multicore.
    Weng N; Soewito B
    Int J Comput Biol Drug Des; 2008; 1(3):313-27. PubMed ID: 20054996
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Finding motifs from all sequences with and without binding sites.
    Leung HC; Chin FY
    Bioinformatics; 2006 Sep; 22(18):2217-23. PubMed ID: 16870937
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.