BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

164 related articles for article (PubMed ID: 20888293)

  • 1. Coarse-grained models: getting more with less.
    Rader AJ
    Curr Opin Pharmacol; 2010 Dec; 10(6):753-9. PubMed ID: 20888293
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Coarse-grained models of protein folding: toy models or predictive tools?
    Clementi C
    Curr Opin Struct Biol; 2008 Feb; 18(1):10-5. PubMed ID: 18160277
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Ab initio discrete molecular dynamics approach to protein folding and aggregation.
    Urbanc B; Borreguero JM; Cruz L; Stanley HE
    Methods Enzymol; 2006; 412():314-38. PubMed ID: 17046666
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Coarse-grained models for proteins.
    Tozzini V
    Curr Opin Struct Biol; 2005 Apr; 15(2):144-50. PubMed ID: 15837171
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A coarse-grained Langevin molecular dynamics approach to de novo protein structure prediction.
    Sasaki TN; Cetin H; Sasai M
    Biochem Biophys Res Commun; 2008 May; 369(2):500-6. PubMed ID: 18294960
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models.
    Chan HS; Zhang Z; Wallin S; Liu Z
    Annu Rev Phys Chem; 2011; 62():301-26. PubMed ID: 21453060
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Separation of time scale and coupling in the motion governed by the coarse-grained and fine degrees of freedom in a polypeptide backbone.
    Murarka RK; Liwo A; Scheraga HA
    J Chem Phys; 2007 Oct; 127(15):155103. PubMed ID: 17949219
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protocols for efficient simulations of long-time protein dynamics using coarse-grained CABS model.
    Jamroz M; Kolinski A; Kmiecik S
    Methods Mol Biol; 2014; 1137():235-50. PubMed ID: 24573485
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A coarse-grained protein force field for folding and structure prediction.
    Maupetit J; Tuffery P; Derreumaux P
    Proteins; 2007 Nov; 69(2):394-408. PubMed ID: 17600832
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Large-scale comparison of protein essential dynamics from molecular dynamics simulations and coarse-grained normal mode analyses.
    Ahmed A; Villinger S; Gohlke H
    Proteins; 2010 Dec; 78(16):3341-52. PubMed ID: 20848551
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Coarse-grained protein model with residue orientation energies derived from atomic force fields.
    Betancourt MR
    J Phys Chem B; 2009 Nov; 113(44):14824-30. PubMed ID: 19817469
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of characteristic protein folding channels in a coarse-grained hydrophobic-polar peptide model.
    Schnabel S; Bachmann M; Janke W
    J Chem Phys; 2007 Mar; 126(10):105102. PubMed ID: 17362088
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Coarse-grained simulations of protein aggregation.
    Cellmer T; Fawzi NL
    Methods Mol Biol; 2012; 899():453-70. PubMed ID: 22735969
    [TBL] [Abstract][Full Text] [Related]  

  • 14. From coarse-grained to atomic-level characterization of protein dynamics: transition state for the folding of B domain of protein A.
    Kmiecik S; Gront D; Kouza M; Kolinski A
    J Phys Chem B; 2012 Jun; 116(23):7026-32. PubMed ID: 22486297
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Coarse-grained models for protein aggregation.
    Wu C; Shea JE
    Curr Opin Struct Biol; 2011 Apr; 21(2):209-20. PubMed ID: 21371882
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Anisotropic effective interactions in a coarse-grained tube picture of proteins.
    Banavar JR; Maritan A; Seno F
    Proteins; 2002 Nov; 49(2):246-54. PubMed ID: 12211004
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Proteins in a shear flow.
    Szymczak P; Cieplak M
    J Chem Phys; 2007 Oct; 127(15):155106. PubMed ID: 17949222
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Dynamic control of protein conformation transition in chromatographic separation based on hydrophobic interactions: molecular dynamics simulation.
    Zhang L; Lu D; Liu Z
    J Chromatogr A; 2009 Mar; 1216(12):2483-90. PubMed ID: 19178912
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Thermodynamics and kinetics of a Gō proteinlike heteropolymer model with two-state folding characteristics.
    Kallias A; Bachmann M; Janke W
    J Chem Phys; 2008 Feb; 128(5):055102. PubMed ID: 18266462
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Coarse-grained models for protein folding and aggregation.
    Derreumaux P
    Methods Mol Biol; 2013; 924():585-600. PubMed ID: 23034764
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.