These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

47 related articles for article (PubMed ID: 20946763)

  • 1. Fast Fenton footprinting: a laboratory-based method for the time-resolved analysis of DNA, RNA and proteins.
    Shcherbakova I; Mitra S; Beer RH; Brenowitz M
    Nucleic Acids Res; 2006 Mar; 34(6):e48. PubMed ID: 16582097
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Complementing global measures of RNA folding with local reports of backbone solvent accessibility by time resolved hydroxyl radical footprinting.
    Schlatterer JC; Brenowitz M
    Methods; 2009 Oct; 49(2):142-7. PubMed ID: 19426806
    [TBL] [Abstract][Full Text] [Related]  

  • 3. High-throughput SHAPE and hydroxyl radical analysis of RNA structure and ribonucleoprotein assembly.
    McGinnis JL; Duncan CD; Weeks KM
    Methods Enzymol; 2009; 468():67-89. PubMed ID: 20946765
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Chemical probing of RNA with the hydroxyl radical at single-atom resolution.
    Ingle S; Azad RN; Jain SS; Tullius TD
    Nucleic Acids Res; 2014 Nov; 42(20):12758-67. PubMed ID: 25313156
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Structural interpretation of DNA-protein hydroxyl-radical footprinting experiments with high resolution using HYDROID.
    Shaytan AK; Xiao H; Armeev GA; Gaykalova DA; Komarova GA; Wu C; Studitsky VM; Landsman D; Panchenko AR
    Nat Protoc; 2018 Nov; 13(11):2535-2556. PubMed ID: 30341436
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Systematic Fe(II)-EDTA Method of Dose-Dependent Hydroxyl Radical Generation for Protein Oxidative Footprinting.
    Chapman JR; Paukner M; Leser M; Teng KW; Koide S; Holder M; Armache KJ; Becker C; Ueberheide B; Brenowitz M
    Anal Chem; 2023 Dec; 95(50):18316-18325. PubMed ID: 38049117
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Accurate protein structure prediction with hydroxyl radical protein footprinting data.
    Biehn SE; Lindert S
    Nat Commun; 2021 Jan; 12(1):341. PubMed ID: 33436604
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Probing RNA-Protein Interactions and RNA Compaction by Sedimentation Velocity Analytical Ultracentrifugation.
    Mitra S; Demeler B
    Methods Mol Biol; 2020; 2113():281-317. PubMed ID: 32006321
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A structural map of oncomiR-1 at single-nucleotide resolution.
    Chakraborty S; Krishnan Y
    Nucleic Acids Res; 2017 Sep; 45(16):9694-9705. PubMed ID: 28934477
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Correlation of Thermal Stability and Structural Distortion of DNA Interstrand Cross-Links Produced from Oxidized Abasic Sites with Their Selective Formation and Repair.
    Ghosh S; Greenberg MM
    Biochemistry; 2015 Oct; 54(40):6274-83. PubMed ID: 26426430
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An RNA aptamer possessing a novel monovalent cation-mediated fold inhibits lysozyme catalysis by inhibiting the binding of long natural substrates.
    Padlan CS; Malashkevich VN; Almo SC; Levy M; Brenowitz M; Girvin ME
    RNA; 2014 Apr; 20(4):447-61. PubMed ID: 24570482
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Massive parallel-sequencing-based hydroxyl radical probing of RNA accessibility.
    Kielpinski LJ; Vinther J
    Nucleic Acids Res; 2014 Apr; 42(8):e70. PubMed ID: 24569351
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Understanding the transcriptome through RNA structure.
    Wan Y; Kertesz M; Spitale RC; Segal E; Chang HY
    Nat Rev Genet; 2011 Aug; 12(9):641-55. PubMed ID: 21850044
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Hydroxyl-radical footprinting to probe equilibrium changes in RNA tertiary structure.
    Shcherbakova I; Mitra S
    Methods Enzymol; 2009; 468():31-46. PubMed ID: 20946763
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Monitoring structural changes in nucleic acids with single residue spatial and millisecond time resolution by quantitative hydroxyl radical footprinting.
    Shcherbakova I; Brenowitz M
    Nat Protoc; 2008; 3(2):288-302. PubMed ID: 18274531
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mapping nucleic acid structure by hydroxyl radical cleavage.
    Tullius TD; Greenbaum JA
    Curr Opin Chem Biol; 2005 Apr; 9(2):127-34. PubMed ID: 15811796
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A microfluidic device that generates hydroxyl radicals to probe the solvent accessible surface of nucleic acids.
    Jones CD; Schlatterer JC; Brenowitz M; Pollack L
    Lab Chip; 2011 Oct; 11(20):3458-64. PubMed ID: 21863183
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Monitoring equilibrium changes in RNA structure by 'peroxidative' and 'oxidative' hydroxyl radical footprinting.
    Bachu R; Padlan FC; Rouhanifard S; Brenowitz M; Schlatterer JC
    J Vis Exp; 2011 Oct; (56):e3244. PubMed ID: 22025107
    [TBL] [Abstract][Full Text] [Related]  

  • 19.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 3.