641 related articles for article (PubMed ID: 20946807)
1. ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites.
Lefrançois P; Zheng W; Snyder M
Methods Enzymol; 2010; 470():77-104. PubMed ID: 20946807
[TBL] [Abstract][Full Text] [Related]
2. Analyzing transcription factor occupancy during embryo development using ChIP-seq.
Ghavi-Helm Y; Furlong EE
Methods Mol Biol; 2012; 786():229-45. PubMed ID: 21938630
[TBL] [Abstract][Full Text] [Related]
3. Mapping protein-DNA interactions using ChIP-sequencing.
Massie CE; Mills IG
Methods Mol Biol; 2012; 809():157-73. PubMed ID: 22113275
[TBL] [Abstract][Full Text] [Related]
4. Chromatin immunoprecipitation and multiplex sequencing (ChIP-Seq) to identify global transcription factor binding sites in the nematode Caenorhabditis elegans.
Brdlik CM; Niu W; Snyder M
Methods Enzymol; 2014; 539():89-111. PubMed ID: 24581441
[TBL] [Abstract][Full Text] [Related]
5. Computational analysis of protein-DNA interactions from ChIP-seq data.
Rougemont J; Naef F
Methods Mol Biol; 2012; 786():263-73. PubMed ID: 21938632
[TBL] [Abstract][Full Text] [Related]
6. Visualizing and characterizing in vivo DNA-binding events and direct target genes of plant transcription factors.
Muiño JM; Angenent GC; Kaufmann K
Methods Mol Biol; 2011; 754():293-305. PubMed ID: 21720960
[TBL] [Abstract][Full Text] [Related]
7. CASSys: an integrated software-system for the interactive analysis of ChIP-seq data.
Alawi M; Kurtz S; Beckstette M
J Integr Bioinform; 2011 Jun; 8(2):155. PubMed ID: 21690655
[TBL] [Abstract][Full Text] [Related]
8. Integrative analysis of ChIP-chip and ChIP-seq dataset.
Zhu LJ
Methods Mol Biol; 2013; 1067():105-24. PubMed ID: 23975789
[TBL] [Abstract][Full Text] [Related]
9. Genome-wide profiling of transcription factor binding and epigenetic marks in adipocytes by ChIP-seq.
Nielsen R; Mandrup S
Methods Enzymol; 2014; 537():261-79. PubMed ID: 24480351
[TBL] [Abstract][Full Text] [Related]
10. Genome-wide identification of DNA-protein interactions using chromatin immunoprecipitation coupled with flow cell sequencing.
Hoffman BG; Jones SJ
J Endocrinol; 2009 Apr; 201(1):1-13. PubMed ID: 19136617
[TBL] [Abstract][Full Text] [Related]
11. Optimizing detection of transcription factor-binding sites in ChIP-seq experiments.
Kallio A; Elo LL
Methods Mol Biol; 2013; 1038():181-91. PubMed ID: 23872976
[TBL] [Abstract][Full Text] [Related]
12. Computational analysis of ChIP-seq data.
Ji H
Methods Mol Biol; 2010; 674():143-59. PubMed ID: 20827590
[TBL] [Abstract][Full Text] [Related]
13. Genome-wide in vivo cross-linking of sequence-specific transcription factors.
Li XY; Biggin MD
Methods Mol Biol; 2012; 809():3-26. PubMed ID: 22113265
[TBL] [Abstract][Full Text] [Related]
14. ChIP on chip and ChIP-Seq assays: genome-wide analysis of transcription factor binding and histone modifications.
Pillai S; Chellappan SP
Methods Mol Biol; 2015; 1288():447-72. PubMed ID: 25827896
[TBL] [Abstract][Full Text] [Related]
15. [Finding targets of transcriptional regulators--chromatin immunoprecipitation assay (ChIP)].
Kus-Liśkiewicz M; Widłak W
Postepy Biochem; 2011; 57(4):418-24. PubMed ID: 22568174
[TBL] [Abstract][Full Text] [Related]
16. Identification of transcription factor binding sites derived from transposable element sequences using ChIP-seq.
Conley AB; Jordan IK
Methods Mol Biol; 2010; 674():225-40. PubMed ID: 20827595
[TBL] [Abstract][Full Text] [Related]
17. Genome-wide mapping of the binding sites of proteins that interact with DNA.
Spiro S
Methods Mol Biol; 2012; 881():137-56. PubMed ID: 22639213
[TBL] [Abstract][Full Text] [Related]
18. ChIPseq in Yeast Species: From Chromatin Immunoprecipitation to High-Throughput Sequencing and Bioinformatics Data Analyses.
Lelandais G; Blugeon C; Merhej J
Methods Mol Biol; 2016; 1361():185-202. PubMed ID: 26483023
[TBL] [Abstract][Full Text] [Related]
19. TF Target Mapper: a BLAST search tool for the identification of Transcription Factor target genes.
Horsman S; Moorhouse MJ; de Jager VC; van der Spek P; Grosveld F; Strouboulis J; Katsantoni EZ
BMC Bioinformatics; 2006 Mar; 7():120. PubMed ID: 16524462
[TBL] [Abstract][Full Text] [Related]
20. Characterization of in vivo DNA-binding events of plant transcription factors by ChIP-seq: experimental protocol and computational analysis.
van Mourik H; Muiño JM; Pajoro A; Angenent GC; Kaufmann K
Methods Mol Biol; 2015; 1284():93-121. PubMed ID: 25757769
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
