These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

367 related articles for article (PubMed ID: 20951644)

  • 1. From protein folding to protein function and biomolecular binding by energy landscape theory.
    Schug A; Onuchic JN
    Curr Opin Pharmacol; 2010 Dec; 10(6):709-14. PubMed ID: 20951644
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Water mediation in protein folding and molecular recognition.
    Levy Y; Onuchic JN
    Annu Rev Biophys Biomol Struct; 2006; 35():389-415. PubMed ID: 16689642
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Recent successes of the energy landscape theory of protein folding and function.
    Wolynes PG
    Q Rev Biophys; 2005 Nov; 38(4):405-10. PubMed ID: 16934172
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Energy landscapes and solved protein-folding problems.
    Wolynes PG
    Philos Trans A Math Phys Eng Sci; 2005 Feb; 363(1827):453-64; discussion 464-7. PubMed ID: 15664893
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dominant kinetic paths on biomolecular binding-folding energy landscape.
    Wang J; Zhang K; Lu H; Wang E
    Phys Rev Lett; 2006 Apr; 96(16):168101. PubMed ID: 16712278
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Topology-based modeling of intrinsically disordered proteins: balancing intrinsic folding and intermolecular interactions.
    Ganguly D; Chen J
    Proteins; 2011 Apr; 79(4):1251-66. PubMed ID: 21268115
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identifying the protein folding nucleus using molecular dynamics.
    Dokholyan NV; Buldyrev SV; Stanley HE; Shakhnovich EI
    J Mol Biol; 2000 Mar; 296(5):1183-8. PubMed ID: 10698625
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Geometrical features of the protein folding mechanism are a robust property of the energy landscape: a detailed investigation of several reduced models.
    Oliveira LC; Schug A; Onuchic JN
    J Phys Chem B; 2008 May; 112(19):6131-6. PubMed ID: 18251535
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein folding using fragment assembly and physical energy function.
    Kim SY; Lee W; Lee J
    J Chem Phys; 2006 Nov; 125(19):194908. PubMed ID: 17129168
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Towards understanding the mechanisms of molecular recognition by computer simulations of ligand-protein interactions.
    Verkhivker GM; Rejto PA; Bouzida D; Arthurs S; Colson AB; Freer ST; Gehlhaar DK; Larson V; Luty BA; Marrone T; Rose PW
    J Mol Recognit; 1999; 12(6):371-89. PubMed ID: 10611647
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Navigation and analysis of the energy landscape of small proteins using the activation-relaxation technique.
    Mousseau N; Derreumaux P; Gilbert G
    Phys Biol; 2005 Nov; 2(4):S101-7. PubMed ID: 16280615
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNA and protein folding: common themes and variations.
    Thirumalai D; Hyeon C
    Biochemistry; 2005 Apr; 44(13):4957-70. PubMed ID: 15794634
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Influence of Go-like interactions on global shapes of energy landscapes in beta-barrel forming model proteins: inherent structure analysis and statistical temperature molecular dynamics simulation.
    Kim J; Keyes T
    J Phys Chem B; 2008 Jan; 112(3):954-66. PubMed ID: 18088107
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Mechanisms of protein assembly: lessons from minimalist models.
    Levy Y; Onuchic JN
    Acc Chem Res; 2006 Feb; 39(2):135-42. PubMed ID: 16489733
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Effective stochastic dynamics on a protein folding energy landscape.
    Yang S; Onuchic JN; Levine H
    J Chem Phys; 2006 Aug; 125(5):054910. PubMed ID: 16942260
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Reproducible polypeptide folding and structure prediction using molecular dynamics simulations.
    Seibert MM; Patriksson A; Hess B; van der Spoel D
    J Mol Biol; 2005 Nov; 354(1):173-83. PubMed ID: 16236315
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Self-organization in protein folding and the hydrophobic interaction.
    Gerstman BS; Chapagain PP
    J Chem Phys; 2005 Aug; 123(5):054901. PubMed ID: 16108687
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Coarse-grained models of protein folding: toy models or predictive tools?
    Clementi C
    Curr Opin Struct Biol; 2008 Feb; 18(1):10-5. PubMed ID: 18160277
    [TBL] [Abstract][Full Text] [Related]  

  • 19. All-atom replica exchange molecular simulation of protein BBL.
    Zhang J; Li W; Wang J; Qin M; Wang W
    Proteins; 2008 Aug; 72(3):1038-47. PubMed ID: 18320591
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computer simulations and theory of protein translocation.
    Makarov DE
    Acc Chem Res; 2009 Feb; 42(2):281-9. PubMed ID: 19072704
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.