These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

78 related articles for article (PubMed ID: 20955175)

  • 1. An improved profile-level domain linker propensity index for protein domain boundary prediction.
    Zhang Y; Liu B; Dong Q; Jin VX
    Protein Pept Lett; 2011 Jan; 18(1):7-16. PubMed ID: 20955175
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Domain boundary prediction based on profile domain linker propensity index.
    Dong Q; Wang X; Lin L; Xu Z
    Comput Biol Chem; 2006 Apr; 30(2):127-33. PubMed ID: 16531120
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Armadillo: domain boundary prediction by amino acid composition.
    Dumontier M; Yao R; Feldman HJ; Hogue CW
    J Mol Biol; 2005 Jul; 350(5):1061-73. PubMed ID: 15978619
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Inter-domain linker prediction using amino acid compositional index.
    Shatnawi M; Zaki N
    Comput Biol Chem; 2015 Apr; 55():23-30. PubMed ID: 25677918
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DomNet: protein domain boundary prediction using enhanced general regression network and new profiles.
    Yoo PD; Sikder AR; Taheri J; Zhou BB; Zomaya AY
    IEEE Trans Nanobioscience; 2008 Jun; 7(2):172-81. PubMed ID: 18556265
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties.
    Shatnawi M; Zaki N; Yoo PD
    BMC Bioinformatics; 2014; 15 Suppl 16(Suppl 16):S8. PubMed ID: 25521329
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Sequence-based protein domain boundary prediction using BP neural network with various property profiles.
    Ye L; Liu T; Wu Z; Zhou R
    Proteins; 2008 Apr; 71(1):300-7. PubMed ID: 17932915
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Improving the performance of DomainDiscovery of protein domain boundary assignment using inter-domain linker index.
    Sikder AR; Zomaya AY
    BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S6. PubMed ID: 17254311
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Prediction of protein interdomain linker regions by a hidden Markov model.
    Bae K; Mallick BK; Elsik CG
    Bioinformatics; 2005 May; 21(10):2264-70. PubMed ID: 15746283
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization and prediction of linker sequences of multi-domain proteins by a neural network.
    Miyazaki S; Kuroda Y; Yokoyama S
    J Struct Funct Genomics; 2002; 2(1):37-51. PubMed ID: 12836673
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Extending Protein Domain Boundary Predictors to Detect Discontinuous Domains.
    Xue Z; Jang R; Govindarajoo B; Huang Y; Wang Y
    PLoS One; 2015; 10(10):e0141541. PubMed ID: 26502173
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improvement of domain linker prediction by incorporating loop-length-dependent characteristics.
    Tanaka T; Yokoyama S; Kuroda Y
    Biopolymers; 2006; 84(2):161-8. PubMed ID: 16134173
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
    Melvin I; Ie E; Kuang R; Weston J; Stafford WN; Leslie C
    BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S2. PubMed ID: 17570145
    [TBL] [Abstract][Full Text] [Related]  

  • 14. AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.
    Gewehr JE; Hintermair V; Zimmer R
    Bioinformatics; 2007 May; 23(10):1203-10. PubMed ID: 17379694
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Use of covariance analysis for the prediction of structural domain boundaries from multiple protein sequence alignments.
    Rigden DJ
    Protein Eng; 2002 Feb; 15(2):65-77. PubMed ID: 11917143
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DomCut: prediction of inter-domain linker regions in amino acid sequences.
    Suyama M; Ohara O
    Bioinformatics; 2003 Mar; 19(5):673-4. PubMed ID: 12651735
    [TBL] [Abstract][Full Text] [Related]  

  • 17. COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance.
    Sadreyev R; Grishin N
    J Mol Biol; 2003 Feb; 326(1):317-36. PubMed ID: 12547212
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An Integrated Framework for Functional Annotation of Protein Structural Domains.
    Deng L; Chen Z
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(4):902-13. PubMed ID: 26357331
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Exploiting three kinds of interface propensities to identify protein binding sites.
    Liu B; Wang X; Lin L; Dong Q; Wang X
    Comput Biol Chem; 2009 Aug; 33(4):303-11. PubMed ID: 19646926
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments.
    Gough J; Chothia C
    Nucleic Acids Res; 2002 Jan; 30(1):268-72. PubMed ID: 11752312
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.