142 related articles for article (PubMed ID: 20966005)
1. SmashCell: a software framework for the analysis of single-cell amplified genome sequences.
Harrington ED; Arumugam M; Raes J; Bork P; Relman DA
Bioinformatics; 2010 Dec; 26(23):2979-80. PubMed ID: 20966005
[TBL] [Abstract][Full Text] [Related]
2. DraGnET: software for storing, managing and analyzing annotated draft genome sequence data.
Duncan S; Sirkanungo R; Miller L; Phillips GJ
BMC Bioinformatics; 2010 Feb; 11():100. PubMed ID: 20175920
[TBL] [Abstract][Full Text] [Related]
3. DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses.
Yang J; Chen X; McDermaid A; Ma Q
Bioinformatics; 2017 Aug; 33(16):2586-2588. PubMed ID: 28419194
[TBL] [Abstract][Full Text] [Related]
4. Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
Brendel V; Xing L; Zhu W
Bioinformatics; 2004 May; 20(7):1157-69. PubMed ID: 14764557
[TBL] [Abstract][Full Text] [Related]
5. A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.
Coil D; Jospin G; Darling AE
Bioinformatics; 2015 Feb; 31(4):587-9. PubMed ID: 25338718
[TBL] [Abstract][Full Text] [Related]
6. FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads.
Lam KK; LaButti K; Khalak A; Tse D
Bioinformatics; 2015 Oct; 31(19):3207-9. PubMed ID: 26040454
[TBL] [Abstract][Full Text] [Related]
7. A System for Automated Bacterial (genome) Integrated Annotation--SABIA.
Almeida LG; Paixão R; Souza RC; Costa GC; Barrientos FJ; Santos MT; Almeida DF; Vasconcelos AT
Bioinformatics; 2004 Nov; 20(16):2832-3. PubMed ID: 15087310
[TBL] [Abstract][Full Text] [Related]
8. Comparative genome assembly.
Pop M; Phillippy A; Delcher AL; Salzberg SL
Brief Bioinform; 2004 Sep; 5(3):237-48. PubMed ID: 15383210
[TBL] [Abstract][Full Text] [Related]
9. Interactive gene-order comparison for multiple small genomes.
Kaluszka A; Gibas C
Bioinformatics; 2004 Dec; 20(18):3662-4. PubMed ID: 15256414
[TBL] [Abstract][Full Text] [Related]
10. Site2genome: locating short DNA sequences in whole genomes.
Frith MC; Halees AS; Hansen U; Weng Z
Bioinformatics; 2004 Jun; 20(9):1468-9. PubMed ID: 14962939
[TBL] [Abstract][Full Text] [Related]
11. An ORFome assembly approach to metagenomics sequences analysis.
Ye Y; Tang H
Comput Syst Bioinformatics Conf; 2008; 7():3-13. PubMed ID: 19642264
[TBL] [Abstract][Full Text] [Related]
12. SciRoKo: a new tool for whole genome microsatellite search and investigation.
Kofler R; Schlötterer C; Lelley T
Bioinformatics; 2007 Jul; 23(13):1683-5. PubMed ID: 17463017
[TBL] [Abstract][Full Text] [Related]
13. Genquire: genome annotation browser/editor.
Wilkinson MD; Block D; Crosby WL
Bioinformatics; 2002 Oct; 18(10):1398-9. PubMed ID: 12376386
[TBL] [Abstract][Full Text] [Related]
14. Back to Basics: A Simplified Improvement to Multiple Displacement Amplification for Microbial Single-Cell Genomics.
Sobol MS; Kaster AK
Int J Mol Sci; 2023 Feb; 24(5):. PubMed ID: 36901710
[TBL] [Abstract][Full Text] [Related]
15. Construction of Whole Genomes from Scaffolds Using Single Cell Strand-Seq Data.
Hills M; Falconer E; O'Neill K; Sanders AD; Howe K; Guryev V; Lansdorp PM
Int J Mol Sci; 2021 Mar; 22(7):. PubMed ID: 33807210
[TBL] [Abstract][Full Text] [Related]
16. scanPAV: a pipeline for extracting presence-absence variations in genome pairs.
Giordano F; Stammnitz MR; Murchison EP; Ning Z
Bioinformatics; 2018 Sep; 34(17):3022-3024. PubMed ID: 29608694
[TBL] [Abstract][Full Text] [Related]
17. Prediction of microbial phenotypes based on comparative genomics.
Feldbauer R; Schulz F; Horn M; Rattei T
BMC Bioinformatics; 2015; 16 Suppl 14(Suppl 14):S1. PubMed ID: 26451672
[TBL] [Abstract][Full Text] [Related]
18. CSAR: a contig scaffolding tool using algebraic rearrangements.
Chen KT; Liu CL; Huang SH; Shen HT; Shieh YK; Chiu HT; Lu CL
Bioinformatics; 2018 Jan; 34(1):109-111. PubMed ID: 28968788
[TBL] [Abstract][Full Text] [Related]
19. TERMINUS--Telomeric End-Read Mining IN Unassembled Sequences.
Li W; Rehmeyer CJ; Staben C; Farman ML
Bioinformatics; 2005 Apr; 21(8):1695-8. PubMed ID: 15585532
[TBL] [Abstract][Full Text] [Related]
20. HideNseek, a post-genome approach to locate transgenes exemplified in Arabidopsis thaliana.
Yang G; Hall TC
Bioinformatics; 2006 Mar; 22(5):523-6. PubMed ID: 16357035
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]