These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

420 related articles for article (PubMed ID: 20980272)

  • 1. Identification of subfamily-specific sites based on active sites modeling and clustering.
    de Melo-Minardi RC; Bastard K; Artiguenave F
    Bioinformatics; 2010 Dec; 26(24):3075-82. PubMed ID: 20980272
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
    Das S; Lee D; Sillitoe I; Dawson NL; Lees JG; Orengo CA
    Bioinformatics; 2015 Nov; 31(21):3460-7. PubMed ID: 26139634
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Isofunctional Protein Subfamily Detection Using Data Integration and Spectral Clustering.
    Boari de Lima E; Meira W; Melo-Minardi RC
    PLoS Comput Biol; 2016 Jun; 12(6):e1005001. PubMed ID: 27348631
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Analysis and prediction of functional sub-types from protein sequence alignments.
    Hannenhalli SS; Russell RB
    J Mol Biol; 2000 Oct; 303(1):61-76. PubMed ID: 11021970
    [TBL] [Abstract][Full Text] [Related]  

  • 5. EnzDP: improved enzyme annotation for metabolic network reconstruction based on domain composition profiles.
    Nguyen NN; Srihari S; Leong HW; Chong KF
    J Bioinform Comput Biol; 2015 Oct; 13(5):1543003. PubMed ID: 26542446
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Enhanced function annotations for Drosophila serine proteases: a case study for systematic annotation of multi-member gene families.
    Shah PK; Tripathi LP; Jensen LJ; Gahnim M; Mason C; Furlong EE; Rodrigues V; White KP; Bork P; Sowdhamini R
    Gene; 2008 Jan; 407(1-2):199-215. PubMed ID: 17996400
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of topological clustering within protein networks using edge metrics that evaluate full sequence, full structure, and active site microenvironment similarity.
    Leuthaeuser JB; Knutson ST; Kumar K; Babbitt PC; Fetrow JS
    Protein Sci; 2015 Sep; 24(9):1423-39. PubMed ID: 26073648
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Sequence-based enzyme catalytic domain prediction using clustering and aggregated mutual information content.
    Choi K; Kim S
    J Bioinform Comput Biol; 2011 Oct; 9(5):597-611. PubMed ID: 21976378
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Automatic annotation of protein function based on family identification.
    Abascal F; Valencia A
    Proteins; 2003 Nov; 53(3):683-92. PubMed ID: 14579359
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The bologna annotation resource: a non hierarchical method for the functional and structural annotation of protein sequences relying on a comparative large-scale genome analysis.
    Bartoli L; Montanucci L; Fronza R; Martelli PL; Fariselli P; Carota L; Donvito G; Maggi GP; Casadio R
    J Proteome Res; 2009 Sep; 8(9):4362-71. PubMed ID: 19552451
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Clustering the annotation space of proteins.
    Kunin V; Ouzounis CA
    BMC Bioinformatics; 2005 Feb; 6():24. PubMed ID: 15703069
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores.
    Wilson CA; Kreychman J; Gerstein M
    J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Common Structural Core of Three-Dozen Residues Reveals Intersuperfamily Relationships.
    Mönttinen HA; Ravantti JJ; Poranen MM
    Mol Biol Evol; 2016 Jul; 33(7):1697-710. PubMed ID: 26931141
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Evolution of function in protein superfamilies, from a structural perspective.
    Todd AE; Orengo CA; Thornton JM
    J Mol Biol; 2001 Apr; 307(4):1113-43. PubMed ID: 11286560
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence.
    Bernardes J; Zaverucha G; Vaquero C; Carbone A
    PLoS Comput Biol; 2016 Jul; 12(7):e1005038. PubMed ID: 27472895
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CoeViz: a web-based tool for coevolution analysis of protein residues.
    Baker FN; Porollo A
    BMC Bioinformatics; 2016 Mar; 17():119. PubMed ID: 26956673
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evaluation of features for catalytic residue prediction in novel folds.
    Youn E; Peters B; Radivojac P; Mooney SD
    Protein Sci; 2007 Feb; 16(2):216-26. PubMed ID: 17189479
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The Bologna Annotation Resource (BAR 3.0): improving protein functional annotation.
    Profiti G; Martelli PL; Casadio R
    Nucleic Acids Res; 2017 Jul; 45(W1):W285-W290. PubMed ID: 28453653
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Relationships between functional subclasses and information contained in active-site and ligand-binding residues in diverse superfamilies.
    Nagao C; Nagano N; Mizuguchi K
    Proteins; 2010 Aug; 78(10):2369-84. PubMed ID: 20544971
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Revealing remote protein homology with sequence similarity and a modularity-based approach.
    Mei J; Yang X; Zhou W
    Theor Biol Forum; 2011; 104(1):57-68. PubMed ID: 22220355
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.