These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
111 related articles for article (PubMed ID: 21038037)
1. Using one-step perturbation to predict the folding equilibrium of differently stereochemically substituted β-peptides. Lin Z; van Gunsteren WF Phys Chem Chem Phys; 2010 Dec; 12(47):15442-7. PubMed ID: 21038037 [TBL] [Abstract][Full Text] [Related]
2. Prediction of folding equilibria of differently substituted peptides using one-step perturbation. Lin Z; Kornfeld J; Mächler M; van Gunsteren WF J Am Chem Soc; 2010 Jun; 132(21):7276-8. PubMed ID: 20459089 [TBL] [Abstract][Full Text] [Related]
3. Using one-step perturbation to predict the effect of changing force-field parameters on the simulated folding equilibrium of a beta-peptide in solution. Lin Z; Liu H; van Gunsteren WF J Comput Chem; 2010 Oct; 31(13):2419-27. PubMed ID: 20652985 [TBL] [Abstract][Full Text] [Related]
4. Exploring the effect of side-chain substitutions upon the secondary structure preferences of β-peptides. Lin Z; van Gunsteren WF J Phys Chem B; 2011 Nov; 115(44):12984-92. PubMed ID: 21967665 [TBL] [Abstract][Full Text] [Related]
5. Influence of variation of a side chain on the folding equilibrium of a β-peptide: limitations of one-step perturbation. Lin Z; van Gunsteren WF J Comput Chem; 2013 Aug; 34(22):1899-906. PubMed ID: 23712925 [TBL] [Abstract][Full Text] [Related]
6. Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding. Griffiths-Jones SR; Maynard AJ; Searle MS J Mol Biol; 1999 Oct; 292(5):1051-69. PubMed ID: 10512702 [TBL] [Abstract][Full Text] [Related]
7. Slow folding of cross-linked alpha-helical peptides due to steric hindrance. Paoli B; Pellarin R; Caflisch A J Phys Chem B; 2010 Feb; 114(5):2023-7. PubMed ID: 20088553 [TBL] [Abstract][Full Text] [Related]
8. Study of conformation effects on the retention of small peptides in reversed-phase chromatography by thermodynamic analysis and molecular dynamics simulation. Tsai CW; Liu CI; Chan YC; Tsai HH; Ruaan RC J Phys Chem B; 2010 Sep; 114(35):11620-7. PubMed ID: 20712332 [TBL] [Abstract][Full Text] [Related]
9. Computational design of proteins stereochemically optimized in size, stability, and folding speed. Joshi S; Rana S; Wangikar P; Durani S Biopolymers; 2006 Oct; 83(2):122-34. PubMed ID: 16683262 [TBL] [Abstract][Full Text] [Related]
10. Native topology or specific interactions: what is more important for protein folding? Ferrara P; Caflisch A J Mol Biol; 2001 Mar; 306(4):837-50. PubMed ID: 11243792 [TBL] [Abstract][Full Text] [Related]
12. Homochiral stereochemistry: the missing link of structure to energetics in protein folding. Kumar A; Ramakrishnan V; Ranbhor R; Patel K; Durani S J Phys Chem B; 2009 Dec; 113(51):16435-42. PubMed ID: 19947575 [TBL] [Abstract][Full Text] [Related]
13. Membrane binding and structure of de novo designed alpha-helical cationic coiled-coil-forming peptides. Vagt T; Zschörnig O; Huster D; Koksch B Chemphyschem; 2006 Jun; 7(6):1361-71. PubMed ID: 16680794 [TBL] [Abstract][Full Text] [Related]
14. Structural cassette mutagenesis in a de novo designed protein: proof of a novel concept for examining protein folding and stability. Kwok SC; Tripet B; Man JH; Chana MS; Lavigne P; Mant CT; Hodges RS Biopolymers; 1998; 47(1):101-23. PubMed ID: 9692331 [TBL] [Abstract][Full Text] [Related]
15. Length dependence of the coil <--> beta-sheet transition in a membrane environment. Meier M; Seelig J J Am Chem Soc; 2008 Jan; 130(3):1017-24. PubMed ID: 18163629 [TBL] [Abstract][Full Text] [Related]
16. The folding mechanism of collagen-like model peptides explored through detailed molecular simulations. Stultz CM Protein Sci; 2006 Sep; 15(9):2166-77. PubMed ID: 16943446 [TBL] [Abstract][Full Text] [Related]
17. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces. Ma B; Nussinov R J Mol Biol; 2000 Mar; 296(4):1091-104. PubMed ID: 10686106 [TBL] [Abstract][Full Text] [Related]
18. Simulation of beta-depsipeptides: the effect of missing hydrogen-bond donors on their folding equilibria. Gattin Z; Glättli A; Jaun B; van Gunsteren WF Biopolymers; 2007 Mar; 85(4):318-32. PubMed ID: 17173308 [TBL] [Abstract][Full Text] [Related]
19. Understanding the mechanism of beta-hairpin folding via phi-value analysis. Du D; Tucker MJ; Gai F Biochemistry; 2006 Feb; 45(8):2668-78. PubMed ID: 16489760 [TBL] [Abstract][Full Text] [Related]
20. Folding and unfolding of two mixed alpha/beta peptides. Wang D; Jaun B; van Gunsteren WF Chembiochem; 2009 Aug; 10(12):2032-41. PubMed ID: 19575368 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]