133 related articles for article (PubMed ID: 21058401)
1. Integrated prediction of the effect of mutations on multiple protein characteristics.
Johnston MA; Søndergaard CR; Nielsen JE
Proteins; 2011 Jan; 79(1):165-78. PubMed ID: 21058401
[TBL] [Abstract][Full Text] [Related]
2. Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis.
Masso M; Vaisman II
Bioinformatics; 2008 Sep; 24(18):2002-9. PubMed ID: 18632749
[TBL] [Abstract][Full Text] [Related]
3. Engineering the independent folding of the subtilisin BPN' prodomain: analysis of two-state folding versus protein stability.
Ruvinov S; Wang L; Ruan B; Almog O; Gilliland GL; Eisenstein E; Bryan PN
Biochemistry; 1997 Aug; 36(34):10414-21. PubMed ID: 9265621
[TBL] [Abstract][Full Text] [Related]
4. Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details.
Potapov V; Cohen M; Schreiber G
Protein Eng Des Sel; 2009 Sep; 22(9):553-60. PubMed ID: 19561092
[TBL] [Abstract][Full Text] [Related]
5. pKD: re-designing protein pKa values.
Tynan-Connolly BM; Nielsen JE
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W48-51. PubMed ID: 16845054
[TBL] [Abstract][Full Text] [Related]
6. Robust prediction of mutation-induced protein stability change by property encoding of amino acids.
Kang S; Chen G; Xiao G
Protein Eng Des Sel; 2009 Feb; 22(2):75-83. PubMed ID: 19054789
[TBL] [Abstract][Full Text] [Related]
7. Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations.
Guerois R; Nielsen JE; Serrano L
J Mol Biol; 2002 Jul; 320(2):369-87. PubMed ID: 12079393
[TBL] [Abstract][Full Text] [Related]
8. Performance of protein stability predictors.
Khan S; Vihinen M
Hum Mutat; 2010 Jun; 31(6):675-84. PubMed ID: 20232415
[TBL] [Abstract][Full Text] [Related]
9. MD simulation of subtilisin BPN' in a crystal environment.
Heiner AP; Berendsen HJ; van Gunsteren WF
Proteins; 1992 Dec; 14(4):451-64. PubMed ID: 1438183
[TBL] [Abstract][Full Text] [Related]
10. Accurate prediction for atomic-level protein design and its application in diversifying the near-optimal sequence space.
Fromer M; Yanover C
Proteins; 2009 May; 75(3):682-705. PubMed ID: 19003998
[TBL] [Abstract][Full Text] [Related]
11. Bioinformatics-driven, rational engineering of protein thermostability.
Ditursi MK; Kwon SJ; Reeder PJ; Dordick JS
Protein Eng Des Sel; 2006 Nov; 19(11):517-24. PubMed ID: 17003065
[TBL] [Abstract][Full Text] [Related]
12. Enhanced stability of subtilisin by three point mutations.
Narhi LO; Stabinsky Y; Levitt M; Miller L; Sachdev R; Finley S; Park S; Kolvenbach C; Arakawa T; Zukowski M
Biotechnol Appl Biochem; 1991 Feb; 13(1):12-24. PubMed ID: 2054102
[TBL] [Abstract][Full Text] [Related]
13. A neural-network-based method for predicting protein stability changes upon single point mutations.
Capriotti E; Fariselli P; Casadio R
Bioinformatics; 2004 Aug; 20 Suppl 1():i63-8. PubMed ID: 15262782
[TBL] [Abstract][Full Text] [Related]
14. FlexE: efficient molecular docking considering protein structure variations.
Claussen H; Buning C; Rarey M; Lengauer T
J Mol Biol; 2001 Apr; 308(2):377-95. PubMed ID: 11327774
[TBL] [Abstract][Full Text] [Related]
15. Prediction of protein stability changes for single-site mutations using support vector machines.
Cheng J; Randall A; Baldi P
Proteins; 2006 Mar; 62(4):1125-32. PubMed ID: 16372356
[TBL] [Abstract][Full Text] [Related]
16. Exploring the charge space of protein-protein association: a proteomic study.
Shaul Y; Schreiber G
Proteins; 2005 Aug; 60(3):341-52. PubMed ID: 15887221
[TBL] [Abstract][Full Text] [Related]
17. Computational modeling of protein mutant stability: analysis and optimization of statistical potentials and structural features reveal insights into prediction model development.
Parthiban V; Gromiha MM; Abhinandan M; Schomburg D
BMC Struct Biol; 2007 Aug; 7():54. PubMed ID: 17705837
[TBL] [Abstract][Full Text] [Related]
18. SPROUTS: a database for the evaluation of protein stability upon point mutation.
Lonquety M; Lacroix Z; Papandreou N; Chomilier J
Nucleic Acids Res; 2009 Jan; 37(Database issue):D374-9. PubMed ID: 18945702
[TBL] [Abstract][Full Text] [Related]
19. Why are proteins so robust to site mutations?
Taverna DM; Goldstein RA
J Mol Biol; 2002 Jan; 315(3):479-84. PubMed ID: 11786027
[TBL] [Abstract][Full Text] [Related]
20. Computational tools for the analysis and visualization of multiple protein-ligand complexes.
O'Brien SE; Brown DG; Mills JE; Phillips C; Morris G
J Mol Graph Model; 2005 Dec; 24(3):186-94. PubMed ID: 16169759
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
