These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

370 related articles for article (PubMed ID: 21073878)

  • 1. Alternate states of proteins revealed by detailed energy landscape mapping.
    Tyka MD; Keedy DA; André I; Dimaio F; Song Y; Richardson DC; Richardson JS; Baker D
    J Mol Biol; 2011 Jan; 405(2):607-18. PubMed ID: 21073878
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study.
    Ramelot TA; Raman S; Kuzin AP; Xiao R; Ma LC; Acton TB; Hunt JF; Montelione GT; Baker D; Kennedy MA
    Proteins; 2009 Apr; 75(1):147-67. PubMed ID: 18816799
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Variability of conformations at crystal contacts in BPTI represent true low-energy structures: correspondence among lattice packing and molecular dynamics structures.
    Kossiakoff AA; Randal M; Guenot J; Eigenbrot C
    Proteins; 1992 Sep; 14(1):65-74. PubMed ID: 1384033
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Protein NMR structures refined with Rosetta have higher accuracy relative to corresponding X-ray crystal structures.
    Mao B; Tejero R; Baker D; Montelione GT
    J Am Chem Soc; 2014 Feb; 136(5):1893-906. PubMed ID: 24392845
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A large data set comparison of protein structures determined by crystallography and NMR: statistical test for structural differences and the effect of crystal packing.
    Andrec M; Snyder DA; Zhou Z; Young J; Montelione GT; Levy RM
    Proteins; 2007 Nov; 69(3):449-65. PubMed ID: 17623851
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of X-ray and NMR structures: is there a systematic difference in residue contacts between X-ray- and NMR-resolved protein structures?
    Garbuzynskiy SO; Melnik BS; Lobanov MY; Finkelstein AV; Galzitskaya OV
    Proteins; 2005 Jul; 60(1):139-47. PubMed ID: 15856480
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Ab initio computational modeling of loops in G-protein-coupled receptors: lessons from the crystal structure of rhodopsin.
    Mehler EL; Hassan SA; Kortagere S; Weinstein H
    Proteins; 2006 Aug; 64(3):673-90. PubMed ID: 16729264
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparison of NMR and crystal structures of membrane proteins and computational refinement to improve model quality.
    Koehler Leman J; D'Avino AR; Bhatnagar Y; Gray JJ
    Proteins; 2018 Jan; 86(1):57-74. PubMed ID: 29044728
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Free-energy calculations highlight differences in accuracy between X-ray and NMR structures and add value to protein structure prediction.
    Lee MR; Kollman PA
    Structure; 2001 Oct; 9(10):905-16. PubMed ID: 11591346
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Orienting domains in proteins using dipolar couplings measured by liquid-state NMR: differences in solution and crystal forms of maltodextrin binding protein loaded with beta-cyclodextrin.
    Skrynnikov NR; Goto NK; Yang D; Choy WY; Tolman JR; Mueller GA; Kay LE
    J Mol Biol; 2000 Feb; 295(5):1265-73. PubMed ID: 10653702
    [TBL] [Abstract][Full Text] [Related]  

  • 11. [Structure of crambin in solution, crystal and in the trajectories of molecular dynamics simulations].
    Abaturov LV; Nosova NG
    Biofizika; 2013; 58(3):425-44. PubMed ID: 24159811
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles.
    Chaudhury S; Gray JJ
    J Mol Biol; 2008 Sep; 381(4):1068-87. PubMed ID: 18640688
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sampling of the native conformational ensemble of myoglobin via structures in different crystalline environments.
    Kondrashov DA; Zhang W; Aranda R; Stec B; Phillips GN
    Proteins; 2008 Feb; 70(2):353-62. PubMed ID: 17680690
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family.
    Friedland GD; Lakomek NA; Griesinger C; Meiler J; Kortemme T
    PLoS Comput Biol; 2009 May; 5(5):e1000393. PubMed ID: 19478996
    [TBL] [Abstract][Full Text] [Related]  

  • 15. NMR solution structure of the inserted domain of human leukocyte function associated antigen-1.
    Legge GB; Kriwacki RW; Chung J; Hommel U; Ramage P; Case DA; Dyson HJ; Wright PE
    J Mol Biol; 2000 Feb; 295(5):1251-64. PubMed ID: 10653701
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The folding energy landscape and free energy excitations of cytochrome c.
    Weinkam P; Zimmermann J; Romesberg FE; Wolynes PG
    Acc Chem Res; 2010 May; 43(5):652-60. PubMed ID: 20143816
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Systematic evaluation of CS-Rosetta for membrane protein structure prediction with sparse NOE restraints.
    Reichel K; Fisette O; Braun T; Lange OF; Hummer G; Schäfer LV
    Proteins; 2017 May; 85(5):812-826. PubMed ID: 27936510
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A comparative analysis of the equilibrium dynamics of a designed protein inferred from NMR, X-ray, and computations.
    Liu L; Koharudin LM; Gronenborn AM; Bahar I
    Proteins; 2009 Dec; 77(4):927-39. PubMed ID: 19688820
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analyses of protein cores reveal fundamental differences between solution and crystal structures.
    Mei Z; Treado JD; Grigas AT; Levine ZA; Regan L; O'Hern CS
    Proteins; 2020 Sep; 88(9):1154-1161. PubMed ID: 32105366
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NMR structure determination for larger proteins using backbone-only data.
    Raman S; Lange OF; Rossi P; Tyka M; Wang X; Aramini J; Liu G; Ramelot TA; Eletsky A; Szyperski T; Kennedy MA; Prestegard J; Montelione GT; Baker D
    Science; 2010 Feb; 327(5968):1014-8. PubMed ID: 20133520
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.