BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

205 related articles for article (PubMed ID: 21075748)

  • 1. Differential effects of chromatin regulators and transcription factors on gene regulation: a nucleosomal perspective.
    Dong D; Shao X; Zhang Z
    Bioinformatics; 2011 Jan; 27(2):147-52. PubMed ID: 21075748
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identifying cooperative transcription factors in yeast using multiple data sources.
    Lai FJ; Jhu MH; Chiu CC; Huang YM; Wu WS
    BMC Syst Biol; 2014; 8 Suppl 5(Suppl 5):S2. PubMed ID: 25559499
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Nucleosome free regions in yeast promoters result from competitive binding of transcription factors that interact with chromatin modifiers.
    Ozonov EA; van Nimwegen E
    PLoS Comput Biol; 2013; 9(8):e1003181. PubMed ID: 23990766
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Weakly positioned nucleosomes enhance the transcriptional competency of chromatin.
    Belch Y; Yang J; Liu Y; Malkaram SA; Liu R; Riethoven JJ; Ladunga I
    PLoS One; 2010 Sep; 5(9):e12984. PubMed ID: 20886052
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays.
    Levo M; Avnit-Sagi T; Lotan-Pompan M; Kalma Y; Weinberger A; Yakhini Z; Segal E
    Mol Cell; 2017 Feb; 65(4):604-617.e6. PubMed ID: 28212748
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Nucleosomal context of binding sites influences transcription factor binding affinity and gene regulation.
    Dai Z; Dai X; Xiang Q; Feng J
    Genomics Proteomics Bioinformatics; 2009 Dec; 7(4):155-62. PubMed ID: 20172488
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Nucleosome repositioning underlies dynamic gene expression.
    Nocetti N; Whitehouse I
    Genes Dev; 2016 Mar; 30(6):660-72. PubMed ID: 26966245
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae.
    Morris RT; O'Connor TR; Wyrick JJ
    Bioinformatics; 2010 Jan; 26(2):168-74. PubMed ID: 19959498
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nucleosomes Are Essential for Proper Regulation of a Multigated Promoter in Saccharomyces cerevisiae.
    Yarrington RM; Goodrum JM; Stillman DJ
    Genetics; 2016 Feb; 202(2):551-63. PubMed ID: 26627840
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Dynamic changes in nucleosome occupancy are not predictive of gene expression dynamics but are linked to transcription and chromatin regulators.
    Huebert DJ; Kuan PF; Keleş S; Gasch AP
    Mol Cell Biol; 2012 May; 32(9):1645-53. PubMed ID: 22354995
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Nonspecific transcription-factor-DNA binding influences nucleosome occupancy in yeast.
    Afek A; Sela I; Musa-Lempel N; Lukatsky DB
    Biophys J; 2011 Nov; 101(10):2465-75. PubMed ID: 22098745
    [TBL] [Abstract][Full Text] [Related]  

  • 12. [Chromatin structure and transcription regulation in Saccharomyces cerevisiae].
    Osipov SA; Preobrazhenskaia OV; Karpov VL
    Mol Biol (Mosk); 2010; 44(6):966-79. PubMed ID: 21290820
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Functional role of histone variant Htz1 in the stress response to oleate in Saccharomyces cerevisiae.
    Liu H; Li G; Liu L; Wan Y
    Biosci Rep; 2015 May; 35(4):. PubMed ID: 26182431
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Insights into distinct regulatory modes of nucleosome positioning.
    Dai Z; Dai X; Xiang Q; Feng J; Deng Y; Wang J
    BMC Genomics; 2009 Dec; 10():602. PubMed ID: 20003404
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Clustered regulatory elements at nucleosome-depleted regions punctuate a constant nucleosomal landscape in Schizosaccharomyces pombe.
    Soriano I; Quintales L; Antequera F
    BMC Genomics; 2013 Nov; 14(1):813. PubMed ID: 24256300
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Basic helix-loop-helix pioneer factors interact with the histone octamer to invade nucleosomes and generate nucleosome-depleted regions.
    Donovan BT; Chen H; Eek P; Meng Z; Jipa C; Tan S; Bai L; Poirier MG
    Mol Cell; 2023 Apr; 83(8):1251-1263.e6. PubMed ID: 36996811
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The chromatin remodelers RSC and ISW1 display functional and chromatin-based promoter antagonism.
    Parnell TJ; Schlichter A; Wilson BG; Cairns BR
    Elife; 2015 Mar; 4():e06073. PubMed ID: 25821983
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Dissociation rate compensation mechanism for budding yeast pioneer transcription factors.
    Donovan BT; Chen H; Jipa C; Bai L; Poirier MG
    Elife; 2019 Mar; 8():. PubMed ID: 30888317
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Nucleosome organization in the vicinity of transcription factor binding sites in the human genome.
    Nie Y; Cheng X; Chen J; Sun X
    BMC Genomics; 2014 Jun; 15(1):493. PubMed ID: 24942981
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evidence of association between nucleosome occupancy and the evolution of transcription factor binding sites in yeast.
    Swamy KB; Chu WY; Wang CY; Tsai HK; Wang D
    BMC Evol Biol; 2011 May; 11():150. PubMed ID: 21627806
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.