317 related articles for article (PubMed ID: 21082444)
1. Integration of proteomic and metabolomic profiling as well as metabolic modeling for the functional analysis of metabolic networks.
May P; Christian N; Ebenhöh O; Weckwerth W; Walther D
Methods Mol Biol; 2011; 694():341-63. PubMed ID: 21082444
[TBL] [Abstract][Full Text] [Related]
2. MetPA: a web-based metabolomics tool for pathway analysis and visualization.
Xia J; Wishart DS
Bioinformatics; 2010 Sep; 26(18):2342-4. PubMed ID: 20628077
[TBL] [Abstract][Full Text] [Related]
3. MeltDB: a software platform for the analysis and integration of metabolomics experiment data.
Neuweger H; Albaum SP; Dondrup M; Persicke M; Watt T; Niehaus K; Stoye J; Goesmann A
Bioinformatics; 2008 Dec; 24(23):2726-32. PubMed ID: 18765459
[TBL] [Abstract][Full Text] [Related]
4. Investigating the plant response to cadmium exposure by proteomic and metabolomic approaches.
Villiers F; Ducruix C; Hugouvieux V; Jarno N; Ezan E; Garin J; Junot C; Bourguignon J
Proteomics; 2011 May; 11(9):1650-63. PubMed ID: 21462346
[TBL] [Abstract][Full Text] [Related]
5. Visualizing multi-omics data in metabolic networks with the software Omix: a case study.
Droste P; Miebach S; Niedenführ S; Wiechert W; Nöh K
Biosystems; 2011 Aug; 105(2):154-61. PubMed ID: 21575673
[TBL] [Abstract][Full Text] [Related]
6. Insights into plant metabolic networks from steady-state metabolic flux analysis.
Kruger NJ; Ratcliffe RG
Biochimie; 2009 Jun; 91(6):697-702. PubMed ID: 19455743
[TBL] [Abstract][Full Text] [Related]
7. Genome-scale metabolic models: reconstruction and analysis.
Baart GJ; Martens DE
Methods Mol Biol; 2012; 799():107-26. PubMed ID: 21993642
[TBL] [Abstract][Full Text] [Related]
8. Modeling with a view to target identification in metabolic engineering: a critical evaluation of the available tools.
Maertens J; Vanrolleghem PA
Biotechnol Prog; 2010; 26(2):313-31. PubMed ID: 20052739
[TBL] [Abstract][Full Text] [Related]
9. VANTED: A Tool for Integrative Visualization and Analysis of -Omics Data.
Hartmann A; Jozefowicz AM
Methods Mol Biol; 2018; 1696():261-278. PubMed ID: 29086410
[TBL] [Abstract][Full Text] [Related]
10. Metabolomics technology and bioinformatics.
Shulaev V
Brief Bioinform; 2006 Jun; 7(2):128-39. PubMed ID: 16772266
[TBL] [Abstract][Full Text] [Related]
11. Modeling and estimation of dynamic EGFR pathway by data assimilation approach using time series proteomic data.
Tasaki S; Nagasaki M; Oyama M; Hata H; Ueno K; Yoshida R; Higuchi T; Sugano S; Miyano S
Genome Inform; 2006; 17(2):226-38. PubMed ID: 17503395
[TBL] [Abstract][Full Text] [Related]
12. Prediction of metabolic pathways from genome-scale metabolic networks.
Faust K; Croes D; van Helden J
Biosystems; 2011 Aug; 105(2):109-21. PubMed ID: 21645586
[TBL] [Abstract][Full Text] [Related]
13. Taming the hydra of specialized metabolism: how systems biology and comparative approaches are revolutionizing plant biochemistry.
Schilmiller AL; Pichersky E; Last RL
Curr Opin Plant Biol; 2012 Jun; 15(3):338-44. PubMed ID: 22244679
[TBL] [Abstract][Full Text] [Related]
14. Integrated omics approaches in plant systems biology.
Fukushima A; Kusano M; Redestig H; Arita M; Saito K
Curr Opin Chem Biol; 2009 Dec; 13(5-6):532-8. PubMed ID: 19837627
[TBL] [Abstract][Full Text] [Related]
15. Toward the automated generation of genome-scale metabolic networks in the SEED.
DeJongh M; Formsma K; Boillot P; Gould J; Rycenga M; Best A
BMC Bioinformatics; 2007 Apr; 8():139. PubMed ID: 17462086
[TBL] [Abstract][Full Text] [Related]
16. Putting The Plant Metabolic Network pathway databases to work: going offline to gain new capabilities.
Dreher K
Methods Mol Biol; 2014; 1083():151-71. PubMed ID: 24218215
[TBL] [Abstract][Full Text] [Related]
17. MOVE: a multi-level ontology-based visualization and exploration framework for genomic networks.
Bosman DW; Blom EJ; Ogao PJ; Kuipers OP; Roerdink JB
In Silico Biol; 2007; 7(1):35-59. PubMed ID: 17688427
[TBL] [Abstract][Full Text] [Related]
18. Dynamic omics approach identifies nutrition-mediated microbial interactions.
Nakanishi Y; Fukuda S; Chikayama E; Kimura Y; Ohno H; Kikuchi J
J Proteome Res; 2011 Feb; 10(2):824-36. PubMed ID: 21058740
[TBL] [Abstract][Full Text] [Related]
19. Plasma amino acid analysis for diagnosis and amino acid-based metabolic networks.
Kimura T; Noguchi Y; Shikata N; Takahashi M
Curr Opin Clin Nutr Metab Care; 2009 Jan; 12(1):49-53. PubMed ID: 19057187
[TBL] [Abstract][Full Text] [Related]
20. Representing, storing and accessing molecular interaction data: a review of models and tools.
Strömbäck L; Jakoniene V; Tan H; Lambrix P
Brief Bioinform; 2006 Dec; 7(4):331-8. PubMed ID: 17132622
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
