224 related articles for article (PubMed ID: 21106119)
1. Sensitivity analysis of dynamic biological systems with time-delays.
Wu WH; Wang FS; Chang MS
BMC Bioinformatics; 2010 Oct; 11 Suppl 7(Suppl 7):S12. PubMed ID: 21106119
[TBL] [Abstract][Full Text] [Related]
2. Dynamic sensitivity analysis of biological systems.
Wu WH; Wang FS; Chang MS
BMC Bioinformatics; 2008 Dec; 9 Suppl 12(Suppl 12):S17. PubMed ID: 19091016
[TBL] [Abstract][Full Text] [Related]
3. A Parameter Estimation Method for Biological Systems modelled by ODE/DDE Models Using Spline Approximation and Differential Evolution Algorithm.
Zhan C; Situ W; Yeung LF; Tsang PW; Yang G
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(6):1066-76. PubMed ID: 26357044
[TBL] [Abstract][Full Text] [Related]
4. A reliable Taylor series-based computational method for the calculation of dynamic sensitivities in large-scale metabolic reaction systems: algorithm and software evaluation.
Shiraishi F; Tomita T; Iwata M; Berrada AA; Hirayama H
Math Biosci; 2009 Dec; 222(2):73-85. PubMed ID: 19747493
[TBL] [Abstract][Full Text] [Related]
5. A specialized ODE integrator for the efficient computation of parameter sensitivities.
Gonnet P; Dimopoulos S; Widmer L; Stelling J
BMC Syst Biol; 2012 May; 6():46. PubMed ID: 22607742
[TBL] [Abstract][Full Text] [Related]
6. [Estimating the parameters of signal transduction pathways with Levenberg-Marquardt algorithm].
Liu T; Jia J; Wang H; Yue H
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2009 Feb; 26(1):22-9. PubMed ID: 19334547
[TBL] [Abstract][Full Text] [Related]
7. Delay differential equations based models in NONMEM.
Yan X; Bauer R; Koch G; Schropp J; Perez Ruixo JJ; Krzyzanski W
J Pharmacokinet Pharmacodyn; 2021 Dec; 48(6):763-802. PubMed ID: 34302262
[TBL] [Abstract][Full Text] [Related]
8. Solving delay differential equations in S-ADAPT by method of steps.
Bauer RJ; Mo G; Krzyzanski W
Comput Methods Programs Biomed; 2013 Sep; 111(3):715-34. PubMed ID: 23810514
[TBL] [Abstract][Full Text] [Related]
9. Computing paths and cycles in biological interaction graphs.
Klamt S; von Kamp A
BMC Bioinformatics; 2009 Jun; 10():181. PubMed ID: 19527491
[TBL] [Abstract][Full Text] [Related]
10. Mosaic gene network modelling identified new regulatory mechanisms in HCV infection.
Popik OV; Petrovskiy ED; Mishchenko EL; Lavrik IN; Ivanisenko VA
Virus Res; 2016 Jun; 218():71-8. PubMed ID: 26481968
[TBL] [Abstract][Full Text] [Related]
11. Bayesian parameter estimation for nonlinear modelling of biological pathways.
Ghasemi O; Lindsey ML; Yang T; Nguyen N; Huang Y; Jin YF
BMC Syst Biol; 2011; 5 Suppl 3(Suppl 3):S9. PubMed ID: 22784628
[TBL] [Abstract][Full Text] [Related]
12. Efficient classification of complete parameter regions based on semidefinite programming.
Kuepfer L; Sauer U; Parrilo PA
BMC Bioinformatics; 2007 Jan; 8():12. PubMed ID: 17224043
[TBL] [Abstract][Full Text] [Related]
13. Chaos and robustness in a single family of genetic oscillatory networks.
Fu D; Tan P; Kuznetsov A; Molkov YI
PLoS One; 2014; 9(3):e90666. PubMed ID: 24667178
[TBL] [Abstract][Full Text] [Related]
14. Differential simulated annealing: a robust and efficient global optimization algorithm for parameter estimation of biological networks.
Dai Z; Lai L
Mol Biosyst; 2014 Jun; 10(6):1385-92. PubMed ID: 24714701
[TBL] [Abstract][Full Text] [Related]
15. MONALISA for stochastic simulations of Petri net models of biochemical systems.
Balazki P; Lindauer K; Einloft J; Ackermann J; Koch I
BMC Bioinformatics; 2015 Jul; 16():215. PubMed ID: 26156221
[TBL] [Abstract][Full Text] [Related]
16. Time-stepping techniques to enable the simulation of bursting behavior in a physiologically realistic computational islet.
Khuvis S; Gobbert MK; Peercy BE
Math Biosci; 2015 May; 263():1-17. PubMed ID: 25688913
[TBL] [Abstract][Full Text] [Related]
17. Insights into the behaviour of systems biology models from dynamic sensitivity and identifiability analysis: a case study of an NF-kappaB signalling pathway.
Yue H; Brown M; Knowles J; Wang H; Broomhead DS; Kell DB
Mol Biosyst; 2006 Dec; 2(12):640-9. PubMed ID: 17216045
[TBL] [Abstract][Full Text] [Related]
18. Automated sensitivity analysis of stiff biochemical systems using a fourth-order adaptive step size Rosenbrock integration method.
Zou R; Ghosh A
Syst Biol (Stevenage); 2006 Mar; 153(2):79-90. PubMed ID: 16986256
[TBL] [Abstract][Full Text] [Related]
19. Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm.
Stoll G; Viara E; Barillot E; Calzone L
BMC Syst Biol; 2012 Aug; 6():116. PubMed ID: 22932419
[TBL] [Abstract][Full Text] [Related]
20. CRA toolbox: software package for conditional robustness analysis of cancer systems biology models in MATLAB.
Bianconi F; Antonini C; Tomassoni L; Valigi P
BMC Bioinformatics; 2019 Jul; 20(1):385. PubMed ID: 31288758
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]